RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PINK1Q9BXM7 581 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PANK2Q9BZ23 570 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 MCCC2Q9HCC0 563 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KLHL28Q9NXS3 571 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 NLGN3Q9NZ94 848 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SPATA7Q9P0W8 599 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PURGQ9UJV8 347 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CHTOPQ9Y3Y2 248 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CSNK1G3Q9Y6M4 447 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KIF16BQ96L93 1317 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 A0A087X002 238 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TEX48A0A1B0GUV7 120 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 HEATR9A2RTY3 570 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PRSS37A4D1T9 235 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 HAS3O00219 553 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 WRBO00258 174 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ARPC1BO15143 372 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 BBOX1O75936 387 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ERVK-10P10266 1014 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 POU2F1P14859 743 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 IL2RGP31785 369 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GPR183P32249 361 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CDK16Q00536 496 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 DHODHQ02127 395 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GUCY2DQ02846 1103 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 DRP2Q13474 957 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 IDI1Q13907 227 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 DOC2AQ14183 400 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PPP1R3AQ16821 1122 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ECSCRQ19T08 205 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 MICBQ29980 383 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 RFTN2Q52LD8 501 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF57Q68EA5 555 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TTC19Q6DKK2 380 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PAQR6Q6TCH4 344 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 KIF6Q6ZMV9 814 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 Q6ZPB1 254 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TSEN54Q7Z6J9 526 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TMEM17Q86X19 198 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ICA1LQ8NDH6 482 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR6S1Q8NH40 331 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SLC2A14Q8TDB8 520 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SCARB1Q8WTV0 552 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GIMAP1Q8WWP7 306 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 DYRK2Q92630 601 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 RNF41Q9H4P4 317 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 VIPAS39Q9H9C1 493 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 Q9HAA7 133 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 LPAR2Q9HBW0 351 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PAK1IP1Q9NWT1 392 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 MTCH1Q9NZJ7 389 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PPP1R3CQ9UQK1 317 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 RNF215Q9Y6U7 377 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 C5P01031 1676 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 USP54Q70EL1 1684 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 IGHV3-38A0A0C4DH36 116 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FBP2O00757 339 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR7A17O14581 309 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 BUB1O43683 1085 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 RAMP3O60896 148 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FLOT1O75955 427 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 POLR2EP19388 210 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF10P21506 573 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CCT6AP40227 531 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 GDF5P43026 501 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ALDH3B1P43353 468 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SYKP43405 635 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 NUMBP49757 651 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 INHBEP58166 350 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 IRX3P78415 501 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PPIL2Q13356 520 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 DPYSL3Q14195 570 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 EMC2Q15006 297 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CD226Q15762 336 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 MLF2Q15773 248 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SLC15A2Q16348 729 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TMEM225Q6GV28 225 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PWWP2BQ6NUJ5 590 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TRPM8Q7Z2W7 1104 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 BIVMQ86UB2 503 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 NFE4Q86UQ8 179 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TRIM69Q86WT6 500 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ATP6V0D2Q8N8Y2 350 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 FAM83FQ8NEG4 500 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OR4Q3Q8NH05 313 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 NUDCD2Q8WVJ2 157 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TCP11Q8WWU5 503 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 PPP1R16AQ96I34 528 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 OMDQ99983 421 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 C8orf33Q9H7E9 229 aaPredicted RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 UGT1A10Q9HAW8 530 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 CACNG5Q9UF02 275 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TUBGCP4Q9UGJ1 667 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 SLC2A6Q9UGQ3 507 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 TBC1D24Q9ULP9 559 aa1.36□□□□□ -2.19
BRCA1-202ENST00000354071 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 AK6Q9Y3D8 172 aaKnown RBP1.36□□□□□ -2.19
BRCA1-202ENST00000354071 ALG6Q9Y672 507 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms