RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 DNAJA4Q8WW22 397 aaPredicted RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 RERGQ96A58 199 aaPredicted RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 GTPBP2Q9BX10 602 aaKnown RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 SLITRK2Q9H156 845 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 RANBP3Q9H6Z4 567 aaPredicted RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 LSM2Q9Y333 95 aaKnown RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 ADAM18Q9Y3Q7 739 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 PCDHGB7Q9Y5F8 929 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 A0A0G2JPF8 293 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 CENPVL1A0A0U1RR11 272 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 HNRNPCL3B7ZW38 293 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 KHNYNO15037 678 aaKnown RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 HNRNPCL4P0DMR1 293 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 CDK3Q00526 305 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 EEF1A2Q05639 463 aaKnown RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 NDUFAF7Q7L592 441 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 SPRED2Q7Z698 418 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 COPS3Q9UNS2 423 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 NPR2P20594 1047 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 GDNFP39905 211 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 STARP49675 285 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 GDI2P50395 445 aaKnown RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 RAB28P51157 221 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 TPBGQ13641 420 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 PON3Q15166 354 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 GRK1Q15835 563 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 LCTLQ6UWM7 567 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 MOSPD2Q8NHP6 518 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 SLC25A36Q96CQ1 311 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 LMF1Q96S06 567 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 KLK11Q9UBX7 282 aa16.8■□□□□ 0.28
CTSB-202ENST00000353047 TNS1Q9HBL0 1735 aaKnown RBP16.8■□□□□ 0.28
CTSB-202ENST00000353047 SLC43A1O75387 559 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 RCBTB2O95199 551 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 ELAVL3Q14576 367 aaKnown RBP16.79■□□□□ 0.28
CTSB-202ENST00000353047 ZNF627Q7L945 461 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 OR4K14Q8NGD5 310 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 OR5T3Q8NGG3 340 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 HS6ST2Q96MM7 605 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 TSSK2Q96PF2 358 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 ZSCAN32Q9NX65 697 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 VCANP13611 3396 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 LRIT2A6NDA9 550 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 GREM1O60565 184 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 PRDX1Q06830 199 aaKnown RBP16.79■□□□□ 0.28
CTSB-202ENST00000353047 BIKQ13323 160 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 EXOSC2Q13868 293 aaKnown RBP16.79■□□□□ 0.28
CTSB-202ENST00000353047 PDGFRLQ15198 375 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 LRRC28Q86X40 367 aaPredicted RBP16.79■□□□□ 0.28
CTSB-202ENST00000353047 NXPE2Q96DL1 559 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 CALML5Q9NZT1 146 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 CDH10Q9Y6N8 788 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 PTPRDP23468 1912 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 C11orf98E9PRG8 122 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 AGFG1P52594 562 aaKnown RBP16.79■□□□□ 0.28
CTSB-202ENST00000353047 FBXW4P57775 412 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 IRF5Q13568 498 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 SMAD2Q15796 467 aaKnown RBP16.79■□□□□ 0.28
CTSB-202ENST00000353047 SLC35A4Q96G79 324 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 PINK1Q9BXM7 581 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 PIGUQ9H490 435 aa16.79■□□□□ 0.28
CTSB-202ENST00000353047 ATXN7L1Q9ULK2 861 aaPredicted RBP16.79■□□□□ 0.28
CTSB-202ENST00000353047 TMEM129A0AVI4 362 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 DUXAA6NLW8 204 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 OR6A2O95222 327 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ATP5A1P25705 553 aaKnown RBP16.78■□□□□ 0.28
CTSB-202ENST00000353047 CLDN20P56880 219 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ERVK-25P63136 954 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 DUSP5Q16690 384 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ZNF628Q5EBL2 1059 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 C1orf94Q6P1W5 598 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 FAM220AQ7Z4H9 259 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ZNF511Q8NB15 262 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 OR52B4Q8NGK2 314 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ZDHHC1Q8WTX9 485 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ADAD1Q96M93 576 aaKnown RBP16.78■□□□□ 0.28
CTSB-202ENST00000353047 PFDN2Q9UHV9 154 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 POLHQ9Y253 713 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ELOA3DA6NLF2 546 aaPredicted RBP16.78■□□□□ 0.28
CTSB-202ENST00000353047 PLGP00747 810 aaPredicted RBP16.78■□□□□ 0.28
CTSB-202ENST00000353047 PTH2RP49190 550 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 EPHA5P54756 1037 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ZNF33BQ06732 778 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 OR1Q1Q15612 314 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 DEFB115Q30KQ5 88 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ELOA3BQ3SY89 546 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 ALG10BQ5I7T1 473 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 MEPCEQ7L2J0 689 aaKnown RBP16.78■□□□□ 0.28
CTSB-202ENST00000353047 ELOA3Q8NG57 546 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 DVL3Q92997 716 aaPredicted RBP16.78■□□□□ 0.28
CTSB-202ENST00000353047 ULBP3Q9BZM4 244 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 CHP2O43745 196 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 RECKO95980 971 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 LRRC25Q8N386 305 aaPredicted RBP16.78■□□□□ 0.28
CTSB-202ENST00000353047 LINC01555Q8NAE3 123 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 GAL3ST4Q96RP7 486 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 PCBD2Q9H0N5 130 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 DPEP2Q9H4A9 486 aa16.78■□□□□ 0.28
CTSB-202ENST00000353047 NOGQ13253 232 aa16.77■□□□□ 0.28
CTSB-202ENST00000353047 PDE7AQ13946 482 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms