RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 RPTNQ6XPR3 784 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 USP53Q70EK8 1073 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 YIPF5Q969M3 257 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 MED30Q96HR3 178 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 SERINC2Q96SA4 455 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 MKRN2Q9H000 416 aaKnown RBP22.7■■□□□ 1.23
CPNE1-202ENST00000352393 B3GNT2Q9NY97 397 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 SATB2Q9UPW6 733 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 NPFFR2Q9Y5X5 522 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 HEBP2Q9Y5Z4 205 aa22.7■■□□□ 1.23
CPNE1-202ENST00000352393 RIIAD1A6NNX1 92 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 J3QLW9 94 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 PEX12O00623 359 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 SMIM10L1P0DMW3 83 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 CLUP10909 449 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 ZNF19P17023 458 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 CAPZA2P47755 286 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 SLC16A1P53985 500 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 HTRA3P83110 453 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 RUNX2Q13950 521 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 FCRLBQ6BAA4 426 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 VITQ6UXI7 678 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 SLC44A3Q8N4M1 653 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 OR4E2Q8NGC2 313 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 OR5J2Q8NH18 312 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 ZCCHC10Q8TBK6 192 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 SMPDL3BQ92485 455 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 SMIM10Q96HG1 83 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 KLHL1Q9NR64 748 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 FBXO34Q9NWN3 711 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 STMN3Q9NZ72 180 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 ING4Q9UNL4 249 aa22.7■■□□□ 1.22
CPNE1-202ENST00000352393 TMA7Q9Y2S6 64 aaKnown RBP22.7■■□□□ 1.22
CPNE1-202ENST00000352393 TBC1D3EA0A087X179 549 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 NPIPA5A0A0B4J1W7 369 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 NPIPA7E9PJI5 369 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 HYAL3O43820 417 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-202ENST00000352393 SLC35G6P0C7Q6 338 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 NPIPA8P0DM63 369 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 BMP8BP34820 402 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 ACVR1BP36896 505 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 NRG3P56975 720 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 PLAURQ03405 335 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 CRMP1Q14194 572 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 AMZ1Q400G9 498 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 ACSM3Q53FZ2 586 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 CEP78Q5JTW2 689 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 LYPD4Q6UWN0 246 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 BMP8AQ7Z5Y6 402 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 SLC2A12Q8TD20 617 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 HAVCR2Q8TDQ0 301 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 LCN9Q8WX39 176 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 OR2M2Q96R28 347 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 HAO2Q9NYQ3 351 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 ST6GALNAC2Q9UJ37 374 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 MED31Q9Y3C7 131 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 PRR23AA6NEV1 266 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 P2RX6O15547 441 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 NOS1APO75052 506 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-202ENST00000352393 DNAJB6O75190 326 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 TCRBP04435 133 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 LAMP2P13473 410 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 RAB3BP20337 219 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 GJA4P35212 333 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 RPS21P63220 83 aaKnown RBP22.69■■□□□ 1.22
CPNE1-202ENST00000352393 ACTC1P68032 377 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 ACTA1P68133 377 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 ZBTB37Q5TC79 503 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 CD276Q5ZPR3 534 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 FAAH2Q6GMR7 532 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 CDK20Q8IZL9 346 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 BMPERQ8N8U9 685 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 OR13C5Q8NGS8 318 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 SMAP2Q8WU79 429 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-202ENST00000352393 TM4SF19Q96DZ7 209 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 PEX11GQ96HA9 241 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 ADAP2Q9NPF8 381 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 MEPEQ9NQ76 525 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-202ENST00000352393 TMEM74BQ9NUR3 256 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 TEKT2Q9UIF3 430 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 DAPP1Q9UN19 280 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 COLEC10Q9Y6Z7 277 aa22.69■■□□□ 1.22
CPNE1-202ENST00000352393 TRAV27A0A087WT01 109 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 PTP4A3O75365 173 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 UBL3O95164 117 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 SAGP10523 405 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-202ENST00000352393 SOX9P48436 509 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 SGCGQ13326 291 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 SUZ12Q15022 739 aaKnown RBP22.68■■□□□ 1.22
CPNE1-202ENST00000352393 DEFB134Q4QY38 66 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 SSX6Q7RTT6 188 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 ZNF655Q8N720 491 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-202ENST00000352393 OR51J1Q9H342 316 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 PRDM9Q9NQV7 894 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 DUSP22Q9NRW4 184 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 FBXL4Q9UKA2 621 aa22.68■■□□□ 1.22
CPNE1-202ENST00000352393 ELF5Q9UKW6 265 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-202ENST00000352393 TRAV1-2A0A0B4J238 106 aa22.67■■□□□ 1.22
CPNE1-202ENST00000352393 CRYZL1O95825 349 aa22.67■■□□□ 1.22
CPNE1-202ENST00000352393 ANXA3P12429 323 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms