RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 BTCP35070 178 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 PPP2CBP62714 309 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 RPS21P63220 83 aaKnown RBP16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 PPP2CAP67775 309 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 ZNF85Q03923 595 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 TMEM44Q2T9K0 475 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 DCST2Q5T1A1 773 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 SFTPA2Q8IWL1 248 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 LNX2Q8N448 690 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 OR7G1Q8NGA0 311 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 OR10G6Q8NH81 332 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 PTCHD1Q96NR3 888 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 CD93Q9NPY3 652 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 MAT2BQ9NZL9 334 aa16.76■□□□□ 0.27
PTP4A3-202ENST00000349124 PRR23D1E9PI22 279 aaPredicted RBP16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 PPP1R3DO95685 299 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 PRR23D2P0DMB1 279 aaPredicted RBP16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 LAMP2P13473 410 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 CPMP14384 443 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 ARFIP1P53367 373 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 TNK1Q13470 666 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 PLA1AQ53H76 456 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 GID4Q8IVV7 300 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 OR1E3Q8WZA6 343 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 RFT1Q96AA3 541 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 ORAI1Q96D31 301 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 AHCYL2Q96HN2 611 aaKnown RBP16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 OR2A5Q96R48 311 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 TNFRSF13CQ96RJ3 184 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 KXD1Q9BQD3 176 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 ORAI3Q9BRQ5 295 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 KCNN2Q9H2S1 579 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 SRMSQ9H3Y6 488 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 SLC23A1Q9UHI7 598 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 DAPP1Q9UN19 280 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 SIGLEC7Q9Y286 467 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 FGF17O60258 216 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 CT62P0C5K7 136 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 GAAP10253 952 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 POLR2CP19387 275 aaPredicted RBP16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 GNG2P59768 71 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 CAMK2BQ13554 666 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 ENPP7Q6UWV6 458 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 OAFQ86UD1 273 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 RANBP3LQ86VV4 465 aaPredicted RBP16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 LIX1LQ8IVB5 337 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 TRMT10AQ8TBZ6 339 aaKnown RBP16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 GON7Q9BXV9 100 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 ZNF350Q9GZX5 532 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 TRIM36Q9NQ86 728 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 NUDT15Q9NV35 164 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 NTMQ9P121 344 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 ADAM30Q9UKF2 790 aa16.75■□□□□ 0.27
PTP4A3-202ENST00000349124 NT5EP21589 574 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 PITPNBP48739 271 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 RGS1Q08116 209 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 TMEM31Q5JXX7 168 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 TIGD3Q6B0B8 471 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 GRPEL2Q8TAA5 225 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 CNOT9Q92600 299 aaKnown RBP16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 AKAP1Q92667 903 aaKnown RBP eCLIP16.74■□□□□ 0.274e-7■□□□□ 8.7
PTP4A3-202ENST00000349124 GHSRQ92847 366 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 PHF21AQ96BD5 680 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 MS4A3Q96HJ5 214 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 ZFP3Q96NJ6 502 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 CACYBPQ9HB71 228 aaKnown RBP16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 ADGRL4Q9HBW9 690 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 STARD5Q9NSY2 213 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 WSB2Q9NYS7 404 aaPredicted RBP16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 KLF15Q9UIH9 416 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 PRSS38A1L453 326 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 IMPA2O14732 288 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 SBK2P0C263 348 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 SNRPBP14678 240 aaKnown RBP16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 AHCYP23526 432 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 GABRA3P34903 492 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 TSFMP43897 325 aaKnown RBP16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 MAB21L1Q13394 359 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 TP53I3Q53FA7 332 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 ACSM3Q53FZ2 586 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 FAM109BQ6ICB4 259 aaPredicted RBP16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 LRRC28Q86X40 367 aaPredicted RBP16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 SMPDL3BQ92485 455 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 UBL7Q96S82 380 aaPredicted RBP16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 JAM3Q9BX67 310 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 PIGUQ9H490 435 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 NIPAL2Q9H841 368 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 CMC2Q9NRP2 79 aa16.74■□□□□ 0.27
PTP4A3-202ENST00000349124 FZD7O75084 574 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 STX11O75558 287 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 MT-ND5P03915 603 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 NGFRP08138 427 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 SLC35G6P0C7Q6 338 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 NID1P14543 1247 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 TALDO1P37837 337 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 NTRK2Q16620 822 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 PRSS45Q7RTY3 260 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 ZNF619Q8N2I2 560 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 COX18Q8N8Q8 333 aa16.73■□□□□ 0.27
PTP4A3-202ENST00000349124 FLVCR1-AS1Q8TAF5 88 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms