RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 ZNF527Q8NB42 609 aa7.55□□□□□ -1.2
NLRP3-202ENST00000348069 DDOQ99489 341 aa7.55□□□□□ -1.2
NLRP3-202ENST00000348069 TAPBPLQ9BX59 468 aa7.55□□□□□ -1.2
NLRP3-202ENST00000348069 QRSL1Q9H0R6 528 aaKnown RBP7.55□□□□□ -1.2
NLRP3-202ENST00000348069 TMEM168Q9H0V1 697 aa7.55□□□□□ -1.2
NLRP3-202ENST00000348069 B3GAT2Q9NPZ5 323 aa7.55□□□□□ -1.2
NLRP3-202ENST00000348069 PTTG3PQ9NZH4 202 aa7.55□□□□□ -1.2
NLRP3-202ENST00000348069 CDH10Q9Y6N8 788 aa7.55□□□□□ -1.2
NLRP3-202ENST00000348069 C1orf226A1L170 272 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 GTPBP1O00178 669 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 GAPDHSO14556 408 aaPredicted RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ARPC1BO15143 372 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PRAMEF4O60810 478 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 UBXN7O94888 489 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 KLHL18O94889 574 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 FAUP35544 74 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PSMD4P55036 377 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 RPS21P63220 83 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 C4orf46Q504U0 113 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 METTL11BQ5VVY1 283 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PRAMEF9Q5VWM5 478 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 HBMQ6B0K9 141 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 LIN54Q6MZP7 749 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 FAM83HQ6ZRV2 1179 aaPredicted RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 DPPA4Q7L190 304 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SERPINA12Q8IW75 414 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 GPALPP1Q8IXQ4 340 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 C9orf62Q8N4C0 152 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 DUSP18Q8NEJ0 188 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 OR6T1Q8NGN1 323 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 BBS10Q8TAM1 723 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 WDR20Q8TBZ3 569 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 MRPL48Q96GC5 212 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SAMD8Q96LT4 415 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 RBM14Q96PK6 669 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 CDCA3Q99618 268 aaPredicted RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 C1QTNF6Q9BXI9 259 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ZNF436Q9C0F3 470 aaPredicted RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ERVMER34-1Q9H9K5 563 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 MYNNQ9NPC7 610 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SOHLH2Q9NX45 425 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 TAS2R3Q9NYW6 316 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 KLHL42Q9P2K6 505 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ZNF780BQ9Y6R6 833 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 A0A0B4J293 547 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 A8MVJ9 347 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 C5orf67F2Z3F1 127 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 H3BSH0 61 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 CREBL2O60519 120 aaPredicted RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SPDEFO95238 335 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 C5AR1P21730 350 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 DEFB110Q30KQ9 67 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ZNF628Q5EBL2 1059 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 TCTE1Q5JU00 501 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 FAM209BQ5JX69 171 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 CD276Q5ZPR3 534 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 NXPE4Q6UWF7 544 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 FRRS1Q6ZNA5 592 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SLCO4C1Q6ZQN7 724 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 USP53Q70EK8 1073 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PDZD9Q8IXQ8 264 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 UCN3Q969E3 161 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 RGMAQ96B86 450 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 RNF170Q96K19 258 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SFXN2Q96NB2 322 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 CD180Q99467 661 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ATF6BQ99941 703 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SRMSQ9H3Y6 488 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 MCCC2Q9HCC0 563 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SLC35C2Q9NQQ7 365 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 BABAM2Q9NXR7 383 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 THAP10Q9P2Z0 257 aaPredicted RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 AK6Q9Y3D8 172 aaKnown RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 KCNE1BA0A087WTH5 132 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SLC9B1P1A6NJY1 282 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PDCD5O14737 125 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 HRO43593 1189 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 CDC123O75794 336 aaPredicted RBP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 RPN2P04844 631 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 TPOP07202 933 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 NDUFV2P19404 249 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PRPH2P23942 346 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 OMPP47874 163 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PUDPQ08623 228 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PUM1Q14671 1186 aaKnown RBP eCLIP7.54□□□□□ -1.2
NLRP3-202ENST00000348069 CCNJQ5T5M9 372 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PIP5KL1Q5T9C9 394 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ELP2Q6IA86 826 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ALKBH2Q6NS38 261 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 LRRN1Q6UXK5 716 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 SFTPA2Q8IWL1 248 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 ETFBKMTQ8IXQ9 262 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 OR5M3Q8NGP4 307 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 OR51A7Q8NH64 312 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 OR5W2Q8NH69 310 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 PDXPQ96GD0 296 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 LRIG1Q96JA1 1093 aa7.54□□□□□ -1.2
NLRP3-202ENST00000348069 GDF15Q99988 308 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms