RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RAB40BQ12829 278 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 EXOSC7Q15024 291 aaKnown RBP21.67■■□□□ 1.06
NPAS3-201ENST00000346562 TP53INP2Q8IXH6 220 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 ARL11Q969Q4 196 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 RSPRY1Q96DX4 576 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 ADOQ96SZ5 270 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 ULBP2Q9BZM5 246 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 RPS5P46782 204 aaKnown RBP21.67■■□□□ 1.06
NPAS3-201ENST00000346562 SEC61A1P61619 476 aaKnown RBP21.67■■□□□ 1.06
NPAS3-201ENST00000346562 MMP21Q8N119 569 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 OR51D1Q8NGF3 324 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 WIF1Q9Y5W5 379 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 SLC22A7Q9Y694 548 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 RGS6P49758 472 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 CTBSQ01459 385 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 C6orf89Q6UWU4 347 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 FAM160A2Q8N612 972 aaPredicted RBP21.67■■□□□ 1.06
NPAS3-201ENST00000346562 SDSLQ96GA7 329 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 SLC34A2O95436 690 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 FBXO45P0C2W1 286 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 RAB4AP20338 218 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 PRLHRP49683 370 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 ZNF140P52738 457 aaPredicted RBP21.67■■□□□ 1.06
NPAS3-201ENST00000346562 GTDC1Q4AE62 458 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 MFSD9Q8NBP5 474 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 OR7D2Q96RA2 312 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 HAPLN2Q9GZV7 340 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 ASF1BQ9NVP2 202 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 SCRG1O75711 98 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 PTTG1O95997 202 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 PAHP00439 452 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 RDH10Q8IZV5 341 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 OR7G2Q8NG99 324 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 UPRTQ96BW1 309 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 GSTO2Q9H4Y5 243 aa21.67■■□□□ 1.06
NPAS3-201ENST00000346562 YKT6O15498 198 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SEC14L2O76054 403 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 CHRM4P08173 479 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 PPP5CP53041 499 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 AGBL5Q8NDL9 886 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 OR1J2Q8NGS2 313 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 IL1F10Q8WWZ1 152 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 UTP23Q9BRU9 249 aaKnown RBP21.66■■□□□ 1.06
NPAS3-201ENST00000346562 NTMT1Q9BV86 223 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SLC25A31Q9H0C2 315 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SERTAD4Q9NUC0 356 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 HSFX1Q9UBD0 423 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 HHLA2Q9UM44 414 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 MEIS3P2A8K0S8 358 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SMAD6O43541 496 aaKnown RBP21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SERPINA7P05543 415 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 F3P13726 295 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SDC1P18827 310 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 TSFMP43897 325 aaKnown RBP21.66■■□□□ 1.06
NPAS3-201ENST00000346562 C1orf220Q5T0J3 134 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SORCS2Q96PQ0 1159 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SLC25A18Q9H1K4 315 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 TEX10Q9NXF1 929 aaPredicted RBP21.66■■□□□ 1.06
NPAS3-201ENST00000346562 EBF1Q9UH73 591 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 CEBPZOSA8MTT3 80 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 CHRNEQ04844 493 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 MBTPS1Q14703 1052 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 UCN3Q969E3 161 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 SDR39U1Q9NRG7 319 aaPredicted RBP21.66■■□□□ 1.06
NPAS3-201ENST00000346562 EMC9Q9Y3B6 208 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 P2RY14Q15391 338 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 ZNF529Q6P280 563 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 ZNF595Q8IYB9 648 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 OR4N2Q8NGD1 307 aa21.66■■□□□ 1.06
NPAS3-201ENST00000346562 YARS2Q9Y2Z4 477 aaKnown RBP21.66■■□□□ 1.06
NPAS3-201ENST00000346562 CHATP28329 748 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 CLDN10P78369 228 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 EXOSC6Q5RKV6 272 aaKnown RBP21.65■■□□□ 1.06
NPAS3-201ENST00000346562 MRPL43Q8N983 215 aaKnown RBP21.65■■□□□ 1.06
NPAS3-201ENST00000346562 OR1J4Q8NGS1 313 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 ZNF142P52746 1687 aaPredicted RBP21.65■■□□□ 1.06
NPAS3-201ENST00000346562 GPR137BO60478 399 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 SLC16A7O60669 478 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 FAM189BP81408 668 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 DEFB103AP81534 67 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 ANKRD54Q6NXT1 300 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 SULF2Q8IWU5 870 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 SLC6A20Q9NP91 592 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 C1orf105O95561 183 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 RPS17P08708 135 aaKnown RBP21.65■■□□□ 1.06
NPAS3-201ENST00000346562 RAB38P57729 211 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 NCS1P62166 190 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 OR4D6Q8NGJ1 314 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 YPEL5P62699 121 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 GPR176Q14439 515 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 MSMO1Q15800 293 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 PIGCQ92535 297 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 AQP9O43315 295 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 TFP02787 698 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 AHRP35869 848 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 RAB6CQ53S08 254 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 PLAG1Q6DJT9 500 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 COMMD7Q86VX2 200 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 RAB6CQ9H0N0 254 aa21.65■■□□□ 1.06
NPAS3-201ENST00000346562 TESQ9UGI8 421 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms