RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 L3MBTL1Q9Y468 752 aa14.19□□□□□ -0.14
TSPAN4-201ENST00000346501 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 A0A1W2PNV4 684 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 TUBAL3A6NHL2 446 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 TNFSF11O14788 317 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 MSTNO14793 375 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 ADAMDEC1O15204 470 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 EDF1O60869 148 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 DBIP07108 87 aaKnown RBP14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 PRF1P14222 555 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 PRKCAP17252 672 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 SFTPDP35247 375 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 SORDQ00796 357 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 CHRNEQ04844 493 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 FADDQ13158 208 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 SYPL1Q16563 259 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 NDUFAF6Q330K2 333 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 AGKQ53H12 422 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 C3orf33Q6P1S2 294 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 BLOC1S3Q6QNY0 202 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 FRRS1Q6ZNA5 592 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 LUZP2Q86TE4 346 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 GGNQ86UU5 652 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 ATP6V1C2Q8NEY4 427 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 WDR60Q8WVS4 1066 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 FIG4Q92562 907 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 OSTF1Q92882 214 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 CPNE4Q96A23 557 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 ZNF845Q96IR2 970 aaPredicted RBP14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 SLC39A3Q9BRY0 314 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 MCCC2Q9HCC0 563 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 NPHS2Q9NP85 383 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 MED4Q9NPJ6 270 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 DCTN4Q9UJW0 460 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 CORO2BQ9UQ03 480 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 DOCK7Q96N67 2140 aa14.18□□□□□ -0.14
TSPAN4-201ENST00000346501 HCFC1P51610 2035 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 A0A096LPI6 279 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 A0A0G2JND7 137 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 EVPLLA8MZ36 301 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 C5orf58C9J3I9 102 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 H0YC42 278 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 CLIC1O00299 241 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 CXCL13O43927 109 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 OPN1LWP04000 364 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 PSMA4P25789 261 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 FKBP2P26885 142 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 RYKP34925 604 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 KCNJ5P48544 419 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 TPD52P55327 224 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 SIRPAP78324 504 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 MERTKQ12866 999 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 FOXF2Q12947 444 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 SKP2Q13309 424 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 LARS2Q15031 903 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 ZSWIM7Q19AV6 140 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 TMEM176BQ3YBM2 270 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 COX20Q5RI15 118 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 METTL21CQ5VZV1 264 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 FBXW10Q5XX13 1052 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 AP1ARQ63HQ0 302 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 SLC2A7Q6PXP3 512 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 TMEM200AQ86VY9 491 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 ZNF440Q8IYI8 595 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 ANKFN1Q8N957 763 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 POC1BQ8TC44 478 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 FAM222BQ8WU58 562 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 SLC25A43Q8WUT9 341 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 GTF2H4Q92759 462 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 THOC1Q96FV9 657 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 GMPPAQ96IJ6 420 aaPredicted RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 RNF122Q9H9V4 155 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 EXOSC3Q9NQT5 275 aaKnown RBP14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 NDRG3Q9UGV2 375 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 EDARQ9UNE0 448 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 PROCRQ9UNN8 238 aa14.17□□□□□ -0.14
TSPAN4-201ENST00000346501 CENPEQ02224 2701 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 PCNX3Q9H6A9 2034 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 AGAP5A6NIR3 686 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 CASKO14936 926 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 OIP5O43482 229 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 BCHEP06276 602 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 ETFAP13804 333 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 CPOXP36551 454 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 PGM1P36871 562 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 APOBEC1P41238 236 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 HTR3AP46098 478 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 LIN52Q52LA3 116 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 SLC25A53Q5H9E4 307 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 POMZP3Q6PJE2 187 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 PLXDC2Q6UX71 529 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 FAM214BQ7L5A3 538 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 OLIG3Q7RTU3 272 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 STK32CQ86UX6 486 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 ZNF295-AS1Q8N0V1 137 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 SLC38A1Q9H2H9 487 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 ACER3Q9NUN7 267 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 JKAMPQ9P055 326 aa14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-201ENST00000346501 KCNE5Q9UJ90 142 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms