RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NPIPA8P0DM63 369 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 IGFBP2P18065 325 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 ELAVL4P26378 380 aaKnown RBP14.56□□□□□ -0.08
RAB5C-201ENST00000346213 SMSP52788 366 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 LASP1Q14847 261 aaKnown RBP14.56□□□□□ -0.08
RAB5C-201ENST00000346213 C10orf111Q8N326 155 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 RELL2Q8NC24 303 aaPredicted RBP14.56□□□□□ -0.08
RAB5C-201ENST00000346213 FIG4Q92562 907 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 SARAFQ96BY9 339 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 TMCO6Q96DC7 493 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 MS4A4EQ96PG1 132 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 SEMA6AQ9H2E6 1030 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 VCXQ9H320 206 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 TPT1P8Q9HAU6 139 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 ZCCHC3Q9NUD5 404 aaKnown RBP14.56□□□□□ -0.08
RAB5C-201ENST00000346213 RYDENQ9NUL5 291 aaKnown RBP14.56□□□□□ -0.08
RAB5C-201ENST00000346213 MED11Q9P086 117 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 B4GALT7Q9UBV7 327 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 CORO2BQ9UQ03 480 aa14.56□□□□□ -0.08
RAB5C-201ENST00000346213 RPH3AQ9Y2J0 694 aaPredicted RBP14.56□□□□□ -0.08
RAB5C-201ENST00000346213 PHF3Q92576 2039 aaKnown RBP14.56□□□□□ -0.08
RAB5C-201ENST00000346213 EMC8O43402 210 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 GMFGO60234 142 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 UQCRBP14927 111 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 ZNF26P17031 533 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-201ENST00000346213 DDX5P17844 614 aaKnown RBP14.55□□□□□ -0.08
RAB5C-201ENST00000346213 LHX2P50458 406 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 CASP9P55211 416 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 EFR3AQ14156 821 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 TOMM20Q15388 145 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 CD226Q15762 336 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 ERICH5Q6P6B1 374 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 GATSQ8NAP1 163 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 OR4A15Q8NGL6 344 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 GPR151Q8TDV0 419 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 ZFP90Q8TF47 636 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 CDS1Q92903 461 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 EME1Q96AY2 570 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 ARSGQ96EG1 525 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 TREX2Q9BQ50 279 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-201ENST00000346213 SPATA9Q9BWV2 254 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 DSN1Q9H410 356 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 Q9N2J8 555 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 PCDHGB4Q9UN71 923 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 OTOGQ6ZRI0 2925 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 FIGNL2A6NMB9 653 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 KRTAP10-9P60411 292 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 RPP38P78345 283 aaKnown RBP14.55□□□□□ -0.08
RAB5C-201ENST00000346213 SNTB1Q13884 538 aaKnown RBP14.55□□□□□ -0.08
RAB5C-201ENST00000346213 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.55□□□□□ -0.08
RAB5C-201ENST00000346213 OR5D16Q8NGK9 328 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 LILRB4Q8NHJ6 448 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 OR5P2Q8WZ92 322 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 RND1Q92730 232 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 CENPNQ96H22 339 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-201ENST00000346213 TUBA1CQ9BQE3 449 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 CAMK2AQ9UQM7 478 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 SNX8Q9Y5X2 465 aa14.55□□□□□ -0.08
RAB5C-201ENST00000346213 PCNX3Q9H6A9 2034 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 WDR1O75083 606 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 CBR3O75828 277 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 OXSR1O95747 527 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-201ENST00000346213 RAP2AP10114 183 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 HOXB6P17509 224 aaKnown RBP14.54□□□□□ -0.08
RAB5C-201ENST00000346213 CHRNB4P30926 498 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 HSPA13P48723 471 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 DLX5P56178 289 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 CLDN18P56856 261 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 DECR1Q16698 335 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 FAM98BQ52LJ0 330 aaKnown RBP14.54□□□□□ -0.08
RAB5C-201ENST00000346213 ARSKQ6UWY0 536 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 ADGRE4PQ86SQ3 457 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 TRIML2Q8N7C3 387 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 CDRT4Q8N9R6 151 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 C9orf106Q8NAJ2 232 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 ZFP28Q8NHY6 868 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 DUSP19Q8WTR2 217 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 ABTB1Q969K4 478 aaPredicted RBP14.54□□□□□ -0.08
RAB5C-201ENST00000346213 FAM162AQ96A26 154 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 SEPHS2Q99611 448 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 COQ10BQ9H8M1 238 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 DCAF13Q9NV06 445 aaKnown RBP14.54□□□□□ -0.08
RAB5C-201ENST00000346213 TAS2R10Q9NYW0 307 aa14.54□□□□□ -0.08
RAB5C-201ENST00000346213 SRD5A2P31213 254 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 KRT20P35900 424 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 CCT3P49368 545 aaKnown RBP14.53□□□□□ -0.08
RAB5C-201ENST00000346213 AGFG1P52594 562 aaKnown RBP14.53□□□□□ -0.08
RAB5C-201ENST00000346213 ZNF136P52737 540 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 CHRNB3Q05901 458 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 TP53BP2Q13625 1128 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 ATP6AP1Q15904 470 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 VMACQ2NL98 169 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 NDUFAF6Q330K2 333 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 INTS11Q5TA45 600 aaKnown RBP14.53□□□□□ -0.08
RAB5C-201ENST00000346213 MCEMP1Q8IX19 187 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 ZZZ3Q8IYH5 903 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 OR14L1PQ8NHC6 308 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 CA5BP1Q8WTZ4 195 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 RNF145Q96MT1 663 aa14.53□□□□□ -0.08
RAB5C-201ENST00000346213 NR1H4Q96RI1 486 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms