RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ZNF443Q9Y2A4 671 aaPredicted RBP10.74□□□□□ -0.69
SNCA-202ENST00000345009 RPH3AQ9Y2J0 694 aaPredicted RBP10.74□□□□□ -0.69
SNCA-202ENST00000345009 TRGV8A0A0C4DH27 118 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 A0A1B0GUH1 482 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 C7orf72A4D263 438 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 CDHR4A6H8M9 788 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 CCT8L1PA6NM43 557 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 FIGNL2A6NMB9 653 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 M0QX08 132 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 TPOP07202 933 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 PEPDP12955 493 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 GP1BBP13224 206 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 GABRA1P14867 456 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 GNLYP22749 145 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 FKBP2P26885 142 aaKnown RBP10.73□□□□□ -0.69
SNCA-202ENST00000345009 RYKP34925 604 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 PTGER4P35408 488 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 HTR3AP46098 478 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 SKP2Q13309 424 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 BCL2A1Q16548 175 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 SAMD4BQ5PRF9 694 aaKnown RBP10.73□□□□□ -0.69
SNCA-202ENST00000345009 VASNQ6EMK4 673 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 C8orf82Q6P1X6 216 aaPredicted RBP10.73□□□□□ -0.69
SNCA-202ENST00000345009 MTFR2Q6P444 385 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 CBLN3Q6UW01 205 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 ARSKQ6UWY0 536 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 CHMP1BQ7LBR1 199 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 HMGN2P46Q86SG4 172 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 VRK2Q86Y07 508 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 MICU2Q8IYU8 434 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 LINC00528Q8N1L1 170 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 ARHGAP24Q8N264 748 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 C10orf111Q8N326 155 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 GTPBP8Q8N3Z3 284 aaPredicted RBP10.73□□□□□ -0.69
SNCA-202ENST00000345009 FAM71CQ8NEG0 241 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 ZNF563Q8TA94 476 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 FAM57AQ8TBR7 257 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 GPR119Q8TDV5 335 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 LZICQ8WZA0 190 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 MRGPRX4Q96LA9 322 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 KCTD14Q9BQ13 255 aaPredicted RBP10.73□□□□□ -0.69
SNCA-202ENST00000345009 PINK1Q9BXM7 581 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 TP63Q9H3D4 680 aaPredicted RBP10.73□□□□□ -0.69
SNCA-202ENST00000345009 ALG2Q9H553 416 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 SERINC1Q9NRX5 453 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 CMTM6Q9NX76 183 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 ALKBH4Q9NXW9 302 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 BAG5Q9UL15 447 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 SLC6A5Q9Y345 797 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 AP4B1Q9Y6B7 739 aa10.73□□□□□ -0.69
SNCA-202ENST00000345009 CENPVL1A0A0U1RR11 272 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 GJE1A6NN92 205 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 AHRRA9YTQ3 701 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 ADAM10O14672 748 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 WDR1O75083 606 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 ATP5HO75947 161 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 MFN2O95140 757 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 C8BP07358 591 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 STSP08842 583 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 BMP7P18075 431 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 POU3F2P20265 443 aaPredicted RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 TCEA1P23193 301 aaKnown RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 RASSF2P50749 326 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 RNF144AP50876 292 aaPredicted RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 GZMMP51124 257 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 PER3P56645 1201 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 PCBP3P57721 371 aaKnown RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 EEF1A1P68104 462 aaKnown RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 HSF1Q00613 529 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 MRPL49Q13405 166 aaKnown RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 QPRTQ15274 297 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 EIF2S3LQ2VIR3 472 aaKnown RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 PLPPR5Q32ZL2 321 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 GXYLT1Q4G148 440 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 DHRS4L2Q6PKH6 230 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 ZNF836Q6ZNA1 936 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 Q6ZPB1 254 aaPredicted RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 CCDC80Q76M96 950 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 DEFB107AQ8IZN7 70 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 CNOT9Q92600 299 aaKnown RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 PROX1Q92786 737 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 CDRT15Q96T59 188 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 TIMP4Q99727 224 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 RLIMQ9NVW2 624 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 DNAJB12Q9NXW2 375 aaKnown RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 TMEM181Q9P2C4 612 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 ABCD2Q9UBJ2 740 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 ZNF835Q9Y2P0 537 aa10.72□□□□□ -0.69
SNCA-202ENST00000345009 SPIN1Q9Y657 262 aaPredicted RBP10.72□□□□□ -0.69
SNCA-202ENST00000345009 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 OR2M5A3KFT3 312 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 CLDN24A6NM45 220 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 FAAHO00519 579 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 NME4O00746 187 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 WISP1O95388 367 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 CPN1P15169 458 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 ELK4P28324 431 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 APOBEC1P41238 236 aaKnown RBP10.71□□□□□ -0.69
SNCA-202ENST00000345009 SLC1A3P43003 542 aa10.71□□□□□ -0.69
SNCA-202ENST00000345009 IDH2P48735 452 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms