RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ATG12O94817 140 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 ST3GAL3Q11203 375 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 PRAMEF14Q5SWL7 426 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 DCAF12L2Q5VW00 463 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 PRAMEF13Q5VWM6 474 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 ZNF620Q6ZNG0 422 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 FAM83HQ6ZRV2 1179 aaPredicted RBP13.81□□□□□ -0.2
CLCN1-201ENST00000343257 MEPCEQ7L2J0 689 aaKnown RBP13.81□□□□□ -0.2
CLCN1-201ENST00000343257 SMIM4Q8WVI0 70 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 SLC25A28Q96A46 364 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 AHSPQ9NZD4 102 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 SLC7A7Q9UM01 511 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 CAMK2AQ9UQM7 478 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 ASF1AQ9Y294 204 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 SPTBP11277 2137 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 FGBP02675 491 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 THY1P04216 161 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 SORDQ00796 357 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 ACSM1Q08AH1 577 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 FAM26DQ5JW98 314 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 STPG1Q5TH74 334 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 PRPF38BQ5VTL8 546 aaKnown RBP13.81□□□□□ -0.2
CLCN1-201ENST00000343257 KHDRBS2Q5VWX1 349 aaKnown RBP13.81□□□□□ -0.2
CLCN1-201ENST00000343257 OR7E24Q6IFN5 339 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 NIPAL3Q6P499 406 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 BPIFCQ8NFQ6 507 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 OR10K1Q8NGX5 313 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 PEX11GQ96HA9 241 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 OR52D1Q9H346 318 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 ZNF304Q9HCX3 659 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 ACTR10Q9NZ32 417 aa13.81□□□□□ -0.2
CLCN1-201ENST00000343257 H7C2Y5 167 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 ZGLP1P0C6A0 271 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 BSGP35613 385 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 PNLIPRP1P54315 467 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 H2BFSP57053 126 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 PCBP4P57723 403 aaKnown RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 DUSP2Q05923 314 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 PUS10Q3MIT2 529 aaKnown RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 GLDNQ6ZMI3 551 aaPredicted RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 MRGPREQ86SM8 312 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 LRRC56Q8IYG6 542 aaPredicted RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 LINC00471Q8N535 108 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 OR5AR1Q8NGP9 310 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 OR51A7Q8NH64 312 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 PFN4Q8NHR9 129 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 STK35Q8TDR2 534 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 TGM6O95932 706 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 EOMESO95936 686 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 HLA-FP30511 346 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 NAA10P41227 235 aaPredicted RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 RPS15P62841 145 aaKnown RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 GPNMBQ14956 572 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 ZNF660Q6AZW8 331 aaPredicted RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 GDF7Q7Z4P5 450 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 DNAJB7Q7Z6W7 309 aaPredicted RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 C1orf216Q8TAB5 229 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 RGMAQ96B86 450 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 EXOSC3Q9NQT5 275 aaKnown RBP13.8□□□□□ -0.2
CLCN1-201ENST00000343257 MED11Q9P086 117 aa13.8□□□□□ -0.2
CLCN1-201ENST00000343257 ARPC4-TTLL3A0A0A6YYG9 625 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 ACOD1A6NK06 481 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 PYCARD-AS1I3L0S3 204 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 GPR31O00270 319 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 KIAA0355O15063 1070 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 OR1F1O43749 312 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 PPP3CBP16298 524 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 SERTAD2Q14140 314 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 C9orf64Q5T6V5 341 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 GDPD4Q6W3E5 623 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 CYB5D2Q8WUJ1 264 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 DIO2Q92813 273 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 GLYATL1Q969I3 302 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 SLC41A3Q96GZ6 507 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 MNTQ99583 582 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 NKX6-2Q9C056 277 aaPredicted RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 ESRP2Q9H6T0 727 aaKnown RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 IL20Q9NYY1 176 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 TUBAL3A6NHL2 446 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 H7C4K7 107 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 K7ESM1 405 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 SELENOFO60613 162 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 GALR3O60755 368 aaPredicted RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 LEFTY1O75610 366 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 GIPP09681 153 aaPredicted RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 GKN3PP0CG01 181 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 RAP2BP61225 183 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 FLI1Q01543 452 aaPredicted RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 ATXN7L3Q14CW9 347 aaPredicted RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 SLC44A3Q8N4M1 653 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 ING5Q8WYH8 240 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 RAD51AP1Q96B01 352 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 ELP4Q96EB1 424 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 AMDHD1Q96NU7 426 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 GPR174Q9BXC1 333 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 ZNF334Q9HCZ1 680 aaPredicted RBP13.79□□□□□ -0.2
CLCN1-201ENST00000343257 C20orf141Q9NUB4 165 aa13.79□□□□□ -0.2
CLCN1-201ENST00000343257 POT1Q9NUX5 634 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms