RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 PCK2Q16822 640 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 ZNF544Q6NX49 715 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 SSX6Q7RTT6 188 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 OR14A16Q8NHC5 309 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 PHYHIPQ92561 330 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 EXOSC8Q96B26 276 aaKnown RBP7.47□□□□□ -1.21
CFAP54-201ENST00000342887 IL4I1Q96RQ9 567 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 RPP25Q9BUL9 199 aaKnown RBP7.47□□□□□ -1.21
CFAP54-201ENST00000342887 CD93Q9NPY3 652 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 PHPT1Q9NRX4 125 aaPredicted RBP7.47□□□□□ -1.21
CFAP54-201ENST00000342887 POT1Q9NUX5 634 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 SIDT1Q9NXL6 827 aaKnown RBP7.47□□□□□ -1.21
CFAP54-201ENST00000342887 NLGN3Q9NZ94 848 aa7.47□□□□□ -1.21
CFAP54-201ENST00000342887 PRUNE2Q8WUY3 3088 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 TRBV5-7A0A0A0MS05 114 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 TRAPPC13A5PLN9 417 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 OR6C65A6NJZ3 312 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 TLX2O43763 284 aaPredicted RBP7.46□□□□□ -1.21
CFAP54-201ENST00000342887 IDH3BO43837 385 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 SLC28A2O43868 658 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 FGF17O60258 216 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 NPIPB7O75200 414 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 ZNF254O75437 659 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 CT45A8P0DMV1 189 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 CT45A9P0DMV2 189 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 NT5EP21589 574 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 PTGS2P35354 604 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 SOX6P35712 828 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 RAB38P57729 211 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 E2F1Q01094 437 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 SRSF4Q08170 494 aaKnown RBP7.46□□□□□ -1.21
CFAP54-201ENST00000342887 POM121L1PQ3SYA9 428 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 CT45A2Q5DJT8 189 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 LIPKQ5VXJ0 399 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 FAM199XQ6PEV8 388 aaPredicted RBP7.46□□□□□ -1.21
CFAP54-201ENST00000342887 CCDC28AQ8IWP9 274 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 NPEPL1Q8NDH3 523 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 CREB3L1Q96BA8 519 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 RBM18Q96H35 190 aaKnown RBP7.46□□□□□ -1.21
CFAP54-201ENST00000342887 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.21
CFAP54-201ENST00000342887 ZNF578Q96N58 590 aaPredicted RBP7.46□□□□□ -1.21
CFAP54-201ENST00000342887 GTPBP2Q9BX10 602 aaKnown RBP7.46□□□□□ -1.21
CFAP54-201ENST00000342887 CCDC90BQ9GZT6 254 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 ADAM19Q9H013 955 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 PRO3102Q9H379 93 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 KMT2EQ8IZD2 1858 aa7.46□□□□□ -1.21
CFAP54-201ENST00000342887 NINQ8N4C6 2090 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 A0A1W2PQL4 384 aaPredicted RBP7.46□□□□□ -1.22
CFAP54-201ENST00000342887 POM121BA6NF01 834 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 CHURC1-FNTBB4DL54 471 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 TO15178 435 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 LANCL1O43813 399 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 SLC19A2O60779 497 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 DKK1O94907 266 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 C1QBP02746 253 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 IGKV3-11P04433 115 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 ASAH2BP0C7U1 165 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 SLC35E2P0CK97 266 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 LCN1P31025 176 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 ANXA11P50995 505 aaKnown RBP7.46□□□□□ -1.22
CFAP54-201ENST00000342887 SLC25A1P53007 311 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 ZNF311Q5JNZ3 666 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 DCST2Q5T1A1 773 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 Q6ZSR3 168 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 TMEM99Q8N816 258 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 CDRT4Q8N9R6 151 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 ZNF775Q96BV0 537 aaPredicted RBP7.46□□□□□ -1.22
CFAP54-201ENST00000342887 PEX11GQ96HA9 241 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 NANSQ9NR45 359 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 EML6Q6ZMW3 1958 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 TBC1D3EA0A087X179 549 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 LOC105369274A0A096LPK9 316 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 LOC102723532A0A0G2JNH3 316 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 A0A1W2PP55 124 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 ZNF860A6NHJ4 632 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 FAM170BA6NMN3 283 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 OR52A4PA6NMU1 304 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 C12orf71A8MTZ7 269 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 E9PI62 339 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 PIN1P1O15428 100 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 LINC01565O15544 149 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 IL32P24001 234 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 DPP4P27487 766 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 CMPK1P30085 196 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 NTSP30990 170 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 MRPS21P82921 87 aaKnown RBP7.46□□□□□ -1.22
CFAP54-201ENST00000342887 TP53BP2Q13625 1128 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 TSTA3Q13630 321 aaPredicted RBP7.46□□□□□ -1.22
CFAP54-201ENST00000342887 FAM53BQ14153 422 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 SF3A2Q15428 464 aaKnown RBP7.46□□□□□ -1.22
CFAP54-201ENST00000342887 OR1Q1Q15612 314 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 TRMT12Q53H54 448 aaKnown RBP7.46□□□□□ -1.22
CFAP54-201ENST00000342887 EIPR1Q53HC9 387 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 SLC35D3Q5M8T2 416 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 OR4N4Q8N0Y3 316 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 MRPL38Q96DV4 380 aaKnown RBP7.46□□□□□ -1.22
CFAP54-201ENST00000342887 MRGPRX1Q96LB2 322 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 KCTD7Q96MP8 289 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 SLA2Q9H6Q3 261 aa7.46□□□□□ -1.22
CFAP54-201ENST00000342887 TIGARQ9NQ88 270 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms