RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CCKBRP32239 447 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 CSNK1G2P78368 415 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 PXDC1Q5TGL8 231 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 APOOLQ6UXV4 268 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 KANSL1Q7Z3B3 1105 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 PFN4Q8NHR9 129 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ASB12Q8WXK4 309 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 MOAP1Q96BY2 351 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 C1QTNF2Q9BXJ5 285 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 SEC61A2Q9H9S3 476 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 PELI2Q9HAT8 420 aa11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 ACSS1Q9NUB1 689 aaPredicted RBP11.6□□□□□ -0.55
SNRNP48-201ENST00000342415 SPTBN2O15020 2390 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 THSD7AQ9UPZ6 1657 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 A0A1W2PR48 441 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 PRRT4C9JH25 899 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 RNGTTO60942 597 aaKnown RBP11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 TCRBP04435 133 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 PUDPQ08623 228 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 PCGF3Q3KNV8 242 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ZNF776Q68DI1 518 aaPredicted RBP11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 FAAP20Q6NZ36 180 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ZNF101Q8IZC7 436 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 FAM26EQ8N5C1 309 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC38A3Q99624 504 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 TBL1XR1Q9BZK7 514 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC6A17Q9H1V8 727 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 HPF1Q9NWY4 346 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 FBXL21Q9UKT6 434 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 HEBP2Q9Y5Z4 205 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 MIA3Q5JRA6 1907 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 CDHR4A6H8M9 788 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 H3BQ06 376 aaPredicted RBP11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 H7C1C5 153 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 SGK494L7N484 410 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 RP2O75695 350 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 SIX6O95475 246 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 GIMD1P0DJR0 217 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 IL12BP29460 328 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 P2RY2P41231 377 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 VEGFCP49767 419 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 LCN6P62502 163 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 FIGLAQ6QHK4 219 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 GDF7Q7Z4P5 450 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 KIF18BQ86Y91 864 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 SDR16C5Q8N3Y7 309 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ZNF527Q8NB42 609 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 GALNT6Q8NCL4 622 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ABHD4Q8TB40 342 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 HCAR2Q8TDS4 363 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 SGTBQ96EQ0 304 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 CMKLR1Q99788 373 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 MICU1Q9BPX6 476 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 CD93Q9NPY3 652 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 DCDC2BA2VCK2 349 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 SOX1O00570 391 aaPredicted RBP11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ZNF432O94892 652 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 CLUP10909 449 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 CRYBB2P43320 205 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 VEGFBP49765 207 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ARHGDIBP52566 201 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 CTXN1P60606 82 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ASAH1Q13510 395 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 C1QTNF12Q5T7M4 302 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 TECPR1Q7Z6L1 1165 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ANKRD53Q8N9V6 530 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 MS4A4EQ96PG1 132 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 BARHL1Q9BZE3 327 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 A4GALTQ9NPC4 353 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 IFT46Q9NQC8 304 aa11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 ZNF443Q9Y2A4 671 aaPredicted RBP11.59□□□□□ -0.55
SNRNP48-201ENST00000342415 DNAJC13O75165 2243 aa11.58□□□□□ -0.55
SNRNP48-201ENST00000342415 F13BP05160 661 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 AKT2P31751 481 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 IRS1P35568 1242 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 CD79BP40259 229 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 BCL6P41182 706 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 GZMMP51124 257 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 GPLD1P80108 840 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 TRMT12Q53H54 448 aaKnown RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF362Q5T0B9 420 aaPredicted RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 RAB12Q6IQ22 244 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 PRR22Q8IZ63 422 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 SPERTQ8NA61 448 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 TP53I13Q8NBR0 393 aaPredicted RBP11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 PIGUQ9H490 435 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 FTSJ1Q9UET6 329 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 GPR34Q9UPC5 381 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ARID2Q68CP9 1835 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 KANTRA0A1W2PQU2 76 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 TNFRSF10AO00220 468 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 PEX12O00623 359 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 RDH16O75452 317 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 OR8G3PP0DMU2 310 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 PRKCAP17252 672 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ACTC1P68032 377 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ACTA1P68133 377 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 DCST2Q5T1A1 773 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 TTLL10Q6ZVT0 673 aa11.58□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF227Q86WZ6 799 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms