RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ZDHHC1Q8WTX9 485 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 RLN3Q8WXF3 142 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 FRMD6Q96NE9 622 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 ORAI3Q9BRQ5 295 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 TEX12Q9BXU0 123 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 A0A0A6YYC8 382 aaPredicted RBP18.6■□□□□ 0.57
SPG7-202ENST00000341316 I3L1I5 382 aaPredicted RBP18.6■□□□□ 0.57
SPG7-202ENST00000341316 BHLHE40O14503 412 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 RFPL3O75679 317 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 NKX2-2O95096 273 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 HMGN1P05114 100 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 SLC35E2P0CK97 266 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 GABRA5P31644 462 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 PSG6Q00889 435 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.6■□□□□ 0.573e-6■■■□□ 15.4
SPG7-202ENST00000341316 SMARCD3Q6STE5 483 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 CXXC5Q7LFL8 322 aaKnown RBP18.6■□□□□ 0.57
SPG7-202ENST00000341316 HOXB13Q92826 284 aaPredicted RBP18.6■□□□□ 0.57
SPG7-202ENST00000341316 SECISBP2Q96T21 854 aaKnown RBP18.6■□□□□ 0.57
SPG7-202ENST00000341316 CD180Q99467 661 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 MEPEQ9NQ76 525 aaPredicted RBP18.6■□□□□ 0.57
SPG7-202ENST00000341316 COMMD3Q9UBI1 195 aa18.6■□□□□ 0.57
SPG7-202ENST00000341316 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.59■□□□□ 0.57
SPG7-202ENST00000341316 OR2W5A6NFC9 320 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 J3QRE1 110 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 IGKV1D-16P01601 117 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 MAZP56270 477 aaKnown RBP18.59■□□□□ 0.57
SPG7-202ENST00000341316 CD83Q01151 205 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 DSG2Q14126 1118 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 INSL4Q14641 139 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 OR13C2Q8NGS9 318 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 ENKURQ8TC29 256 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 GRHL3Q8TE85 626 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 SPRYD4Q8WW59 207 aaPredicted RBP18.59■□□□□ 0.57
SPG7-202ENST00000341316 AP3S1Q92572 193 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 HS6ST2Q96MM7 605 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 LRRC61Q9BV99 259 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 KRCC1Q9NPI7 259 aaPredicted RBP18.59■□□□□ 0.57
SPG7-202ENST00000341316 FLRT3Q9NZU0 649 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 HCN3Q9P1Z3 774 aa18.59■□□□□ 0.57
SPG7-202ENST00000341316 SLC9B1P1A6NJY1 282 aa18.58■□□□□ 0.57
SPG7-202ENST00000341316 OR10H2O60403 315 aa18.58■□□□□ 0.57
SPG7-202ENST00000341316 CDC123O75794 336 aaPredicted RBP18.58■□□□□ 0.57
SPG7-202ENST00000341316 APEX1P27695 318 aaKnown RBP18.58■□□□□ 0.57
SPG7-202ENST00000341316 EMDP50402 254 aa18.58■□□□□ 0.57
SPG7-202ENST00000341316 QPRTQ15274 297 aa18.58■□□□□ 0.57
SPG7-202ENST00000341316 CD200R1LQ6Q8B3 271 aa18.58■□□□□ 0.57
SPG7-202ENST00000341316 MCATQ8IVS2 390 aaKnown RBP18.58■□□□□ 0.57
SPG7-202ENST00000341316 RNF113BQ8IZP6 322 aaKnown RBP18.58■□□□□ 0.57
SPG7-202ENST00000341316 KIAA1143Q96AT1 154 aaPredicted RBP18.58■□□□□ 0.57
SPG7-202ENST00000341316 NACC2Q96BF6 587 aa18.58■□□□□ 0.57
SPG7-202ENST00000341316 WSB2Q9NYS7 404 aaPredicted RBP18.58■□□□□ 0.57
SPG7-202ENST00000341316 YES1P07947 543 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 ERV3-1Q14264 604 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 Q5BKY6 102 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 LCN1P1Q5VSP4 162 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 VASNQ6EMK4 673 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 ARMC6Q6NXE6 501 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 ZNF614Q8N883 585 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 C19orf47Q8N9M1 422 aaKnown RBP18.58■□□□□ 0.56
SPG7-202ENST00000341316 OR51G2Q8NGK0 314 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 BPIFA2Q96DR5 249 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 PTCHD1Q96NR3 888 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 ISG20L2Q9H9L3 353 aaKnown RBP18.58■□□□□ 0.56
SPG7-202ENST00000341316 TNFRSF10DQ9UBN6 386 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 MALT1Q9UDY8 824 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 DTX4Q9Y2E6 619 aa18.58■□□□□ 0.56
SPG7-202ENST00000341316 FMO6PO60774 539 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 AK1P00568 194 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 CELP19835 753 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 DRD5P21918 477 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 ATP6V1E1P36543 226 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 MLLT3P42568 568 aaPredicted RBP18.57■□□□□ 0.56
SPG7-202ENST00000341316 TMEM44Q2T9K0 475 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 SNAP47Q5SQN1 464 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 NIPAL3Q6P499 406 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 GLCCI1Q86VQ1 547 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 ARIH2OSQ8N7S6 290 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 TIMP4Q99727 224 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 TMED9Q9BVK6 235 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 H2AFY2Q9P0M6 372 aaPredicted RBP18.57■□□□□ 0.56
SPG7-202ENST00000341316 GSTK1Q9Y2Q3 226 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 MAU2Q9Y6X3 613 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 SYNDIG1LA6NDD5 238 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 CASKO14936 926 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 FOXS1O43638 330 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 FGF9P31371 208 aaPredicted RBP18.57■□□□□ 0.56
SPG7-202ENST00000341316 MAT1AQ00266 395 aaKnown RBP18.57■□□□□ 0.56
SPG7-202ENST00000341316 CSTF1Q05048 431 aaKnown RBP18.57■□□□□ 0.56
SPG7-202ENST00000341316 PRTGQ2VWP7 1150 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 AMZ1Q400G9 498 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 FCRLBQ6BAA4 426 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 TMPRSS11FQ6ZWK6 438 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 KLHL36Q8N4N3 616 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 HDHD5Q9BXW7 423 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 TBC1D17Q9HA65 648 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 FOLH1BQ9HBA9 442 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 SIGLEC7Q9Y286 467 aa18.57■□□□□ 0.56
SPG7-202ENST00000341316 TRAV27A0A087WT01 109 aa18.56■□□□□ 0.56
SPG7-202ENST00000341316 A0A1W2PPC4 97 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms