RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 C15orf54Q8N8G6 183 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 C17orf47Q8NEP4 570 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 SPPL2AQ8TCT8 520 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 MR1Q95460 341 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 MFSD3Q96ES6 412 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 HDHD2Q9H0R4 259 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 SLC6A20Q9NP91 592 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 FZD3Q9NPG1 666 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 SLC35D1Q9NTN3 355 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 NUP205Q92621 2012 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 A0A1B0GW55 424 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 CDC14BO60729 498 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 NCR1O76036 304 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 METTL18O95568 372 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 DUX4L2P0CJ85 424 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 DUX4L3P0CJ86 424 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 DUX4L4P0CJ87 422 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 DUX4L5P0CJ88 424 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 DUX4L6P0CJ89 424 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 DUX4L7P0CJ90 424 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 ACPPP15309 386 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 TPSB2P20231 275 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 EPHA8P29322 1005 aaPredicted RBP15.78■□□□□ 0.12
CDK11B-201ENST00000340677 SHC1P29353 583 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 NAA10P41227 235 aaPredicted RBP15.78■□□□□ 0.12
CDK11B-201ENST00000340677 SLC1A2P43004 574 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 TPSAB1Q15661 275 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 MOGAT2Q3SYC2 334 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 H3F3CQ6NXT2 135 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 IL27RAQ6UWB1 636 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 KCTD9Q7L273 389 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 CYP4Z1Q86W10 505 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 FAM98AQ8NCA5 519 aaKnown RBP15.78■□□□□ 0.12
CDK11B-201ENST00000340677 SELENOMQ8WWX9 145 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 ZNF419Q96HQ0 510 aaPredicted RBP15.78■□□□□ 0.12
CDK11B-201ENST00000340677 ZNF479Q96JC4 524 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 VPS25Q9BRG1 176 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 CCNB1IP1Q9NPC3 277 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 DUX4Q9UBX2 424 aa15.78■□□□□ 0.12
CDK11B-201ENST00000340677 LEF1Q9UJU2 399 aaPredicted RBP15.78■□□□□ 0.12
CDK11B-201ENST00000340677 IFNA17P01571 189 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 NBEAP1P0C6P0 100 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ZNF35P13682 527 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 BMP7P18075 431 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ITPKAP23677 461 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 NDUFS1P28331 727 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 HLXQ14774 488 aaPredicted RBP15.77■□□□□ 0.12
CDK11B-201ENST00000340677 PPM1JQ5JR12 505 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 LRRN1Q6UXK5 716 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ZNF534Q76KX8 674 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 NAXDQ8IW45 347 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 FCGR1BQ92637 280 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 C14orf79Q96F83 325 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 PRDM12Q9H4Q4 367 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 EXOSC3Q9NQT5 275 aaKnown RBP15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ACSS2Q9NR19 701 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 FBXL3Q9UKT7 428 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 SHROOM3Q8TF72 1996 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 IGLV3-10A0A075B6K4 115 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 TCRBV5S2A0A599 114 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 FAM159BA6NKW6 160 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 RFXAPO00287 272 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 NME4O00746 187 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 F10P00742 488 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 SORDQ00796 357 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ELP6Q0PNE2 266 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 SEMA5AQ13591 1074 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ARMC12Q5T9G4 340 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ANKRD34AQ69YU3 496 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 FAM45BPQ6NSW5 357 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ZNF683Q8IZ20 524 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 FAM45AQ8TCE6 357 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 GPR152Q8TDT2 470 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 OTUB1Q96FW1 271 aaPredicted RBP15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ZNF48Q96MX3 618 aaPredicted RBP15.77■□□□□ 0.12
CDK11B-201ENST00000340677 OR51J1Q9H342 316 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 EIF2B3Q9NR50 452 aaKnown RBP15.77■□□□□ 0.12
CDK11B-201ENST00000340677 ZNF358Q9NW07 568 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 YARS2Q9Y2Z4 477 aaKnown RBP15.77■□□□□ 0.12
CDK11B-201ENST00000340677 HS3ST4Q9Y661 456 aa15.77■□□□□ 0.12
CDK11B-201ENST00000340677 BRCA2P51587 3418 aa15.77■□□□□ 0.11
CDK11B-201ENST00000340677 PRR23D1E9PI22 279 aaPredicted RBP15.76■□□□□ 0.11
CDK11B-201ENST00000340677 ADAM10O14672 748 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 MRASO14807 208 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 TLR5O60602 858 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 ATP6AP2O75787 350 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 ALPIP09923 528 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 PRR23D2P0DMB1 279 aaPredicted RBP15.76■□□□□ 0.11
CDK11B-201ENST00000340677 TMEM33P57088 247 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 EFEMP1Q12805 493 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 ARL6IP1Q15041 203 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 NADSYN1Q6IA69 706 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 SLC41A1Q8IVJ1 513 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 SIGLEC11Q96RL6 698 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 DNAJC4Q9NNZ3 241 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 FBXO34Q9NWN3 711 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 SLC35A3Q9Y2D2 325 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 CARHSP1Q9Y2V2 147 aaKnown RBP15.76■□□□□ 0.11
CDK11B-201ENST00000340677 WIF1Q9Y5W5 379 aa15.76■□□□□ 0.11
CDK11B-201ENST00000340677 ZNF840PA6NDX5 716 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms