RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OR52D1Q9H346 318 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 ENPP5Q9UJA9 477 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 R4GN57 208 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF182P17025 639 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 AQP6Q13520 282 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF528Q3MIS6 628 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 FAM199XQ6PEV8 388 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 OVCH1Q7RTY7 1134 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 ALDH16A1Q8IZ83 802 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 TMEM163Q8TC26 289 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 THAP3Q8WTV1 239 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 YIPF6Q96EC8 236 aa20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 CNOT2Q9NZN8 540 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-203ENST00000339162 TRAV27A0A087WT01 109 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 KHNYNO15037 678 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 APOL3O95236 402 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 IL12BP29460 328 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 LIPAP38571 399 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 GPR143P51810 404 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 DBPQ10586 325 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 ULK3Q6PHR2 472 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 MRGPREQ86SM8 312 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 TMCO5AQ8N6Q1 288 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF527Q8NB42 609 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 OR51A7Q8NH64 312 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 FANK1Q8TC84 345 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 RHBDD1Q8TEB9 315 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 SLC38A2Q96QD8 506 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 HHATLQ9HCP6 504 aa20.58■□□□□ 0.89
PDLIM2-203ENST00000339162 M0R082 166 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 MEN1O00255 615 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 ALOX12BO75342 701 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 PLCXD2Q0VAA5 305 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 DOC2BQ14184 412 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 CTF1Q16619 201 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 CCDC157Q569K6 752 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 FNDC7Q5VTL7 733 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 ZBTB46Q86UZ6 589 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 ANKRD13BQ86YJ7 626 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 CDK20Q8IZL9 346 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 WDR36Q8NI36 951 aaKnown RBP20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 C8orf44Q96CB5 159 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 SH3YL1Q96HL8 342 aaPredicted RBP20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 OR5M11Q96RB7 305 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 SLC35A3Q9Y2D2 325 aa20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 RPL36Q9Y3U8 105 aaKnown RBP20.58■□□□□ 0.88
PDLIM2-203ENST00000339162 LNP1A1A4G5 178 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 GTPBP1O00178 669 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 LDOC1O95751 146 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 HSMCR30P0CW71 290 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 UBL4AP11441 157 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 COPZ1P61923 177 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 CRYZQ08257 329 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 NFATC3Q12968 1075 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 DYNC1I2Q13409 638 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 IRF3Q14653 427 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 SPCS2Q15005 226 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 TIGD6Q17RP2 521 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 PGGHGQ32M88 737 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 SMARCD3Q6STE5 483 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 BMP8AQ7Z5Y6 402 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 OR2T33Q8NG76 320 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 ZNF524Q96C55 264 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 HS6ST2Q96MM7 605 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 ZNF426Q9BUY5 554 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 HOXD1Q9GZZ0 328 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 UBQLN3Q9H347 655 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 EVA1AQ9H8M9 152 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 CLEC2DQ9UHP7 191 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 SURF4O15260 269 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 FOXD2O60548 495 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 TBXA2RP21731 343 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 ABCD3P28288 659 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 GRK6P43250 576 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 EMP2P54851 167 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 DCAF7P61962 342 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 ZFP36L1Q07352 338 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 THSD4Q6ZMP0 1018 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 TMPRSS11FQ6ZWK6 438 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 BMPERQ8N8U9 685 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 METTL21AQ8WXB1 218 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 OMA1Q96E52 524 aa20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 MRTO4Q9UKD2 239 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-203ENST00000339162 LRRN3E7EW58 273 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 FGF5P12034 268 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 CD36P16671 472 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 TGFBR2P37173 567 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 SKP2Q13309 424 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 MED22Q15528 200 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 ZSWIM7Q19AV6 140 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 SLC35F1Q5T1Q4 408 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 P2RY8Q86VZ1 359 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 APCDD1LQ8NCL9 501 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 AGBL5Q8NDL9 886 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 ANKK1Q8NFD2 765 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 RPL3LQ92901 407 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 SPSB2Q99619 263 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 CDCA4Q9BXL8 241 aa20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 ZBTB20Q9HC78 741 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-203ENST00000339162 TRIM64BA6NI03 449 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms