RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 SPHARQ15513 63 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 TSTQ16762 297 aaKnown RBP10.22□□□□□ -0.77
LRP1-202ENST00000338962 KLHL22Q53GT1 634 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 ZNF613Q6PF04 617 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 NPSR1Q6W5P4 371 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 USP43Q70EL4 1123 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 TUBA1AQ71U36 451 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 IGFN1Q86VF2 1251 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 GPR135Q8IZ08 494 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CACTIN-AS1Q8N1I8 211 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 RCBTB1Q8NDN9 531 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 DEFB124Q8NES8 71 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 GRHL3Q8TE85 626 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CNOT9Q92600 299 aaKnown RBP10.22□□□□□ -0.77
LRP1-202ENST00000338962 MVB12AQ96EY5 273 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 SH3YL1Q96HL8 342 aaPredicted RBP10.22□□□□□ -0.77
LRP1-202ENST00000338962 PTCHD1Q96NR3 888 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CLEC2DQ9UHP7 191 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
LRP1-202ENST00000338962 ASXL3Q9C0F0 2248 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 TP53BP1Q12888 1972 aaPredicted RBP10.22□□□□□ -0.77
LRP1-202ENST00000338962 A0A1W2PQM1 296 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 IRGMA1A4Y4 181 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 C17orf105B2RV13 164 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 J3QRK9 145 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 NTN3O00634 580 aaPredicted RBP10.22□□□□□ -0.77
LRP1-202ENST00000338962 RAB36O95755 333 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 IGKV1D-16P01601 117 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CT45A8P0DMV1 189 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CT45A9P0DMV2 189 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 MYL12AP19105 171 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 TGFBR1P36897 503 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 OPRL1P41146 370 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 OR1D4P47884 311 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 E2F1Q01094 437 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 PLAURQ03405 335 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 MINDY4Q4G0A6 757 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CT45A2Q5DJT8 189 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 WDR88Q6ZMY6 472 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 GRAMD2AQ8IUY3 354 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CDK20Q8IZL9 346 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CLDN22Q8N7P3 220 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 ANKK1Q8NFD2 765 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 PROKR2Q8NFJ6 384 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 FGF11Q92914 225 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 RFKQ969G6 155 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 CHCHD6Q9BRQ6 235 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 NDC1Q9BTX1 674 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 DPH1Q9BZG8 443 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 QPCTLQ9NXS2 382 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 DLL3Q9NYJ7 618 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 PRODH2Q9UF12 536 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 IL20RAQ9UHF4 553 aa10.22□□□□□ -0.77
LRP1-202ENST00000338962 DIMT1Q9UNQ2 313 aaKnown RBP10.22□□□□□ -0.77
LRP1-202ENST00000338962 SURF4O15260 269 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 DYRK3O43781 588 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 SCG5P05408 212 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 IFI30P13284 250 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 GALNSP34059 522 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 MTNR1AP48039 350 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 PSMD4P55036 377 aaKnown RBP10.21□□□□□ -0.77
LRP1-202ENST00000338962 CFHR1Q03591 330 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 RAB40BQ12829 278 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 ZSWIM7Q19AV6 140 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 TMEM44Q2T9K0 475 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 PGGHGQ32M88 737 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 RNLSQ5VYX0 342 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 WDR74Q6RFH5 385 aaPredicted RBP10.21□□□□□ -0.77
LRP1-202ENST00000338962 HSDL2Q6YN16 418 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 KBTBD8Q8NFY9 601 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 OR52L1Q8NGH7 329 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 OR52I1Q8NGK6 324 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 OR4Q3Q8NH05 313 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 PFN4Q8NHR9 129 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 FANK1Q8TC84 345 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 RNFT2Q96EX2 444 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 OR1F2PQ96R84 312 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 MROQ9BYG7 248 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 RACGAP1Q9H0H5 632 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 OR51E2Q9H255 320 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 LRRN3Q9H3W5 708 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.21□□□□□ -0.77
LRP1-202ENST00000338962 MED17Q9NVC6 651 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 SIDT1Q9NXL6 827 aaKnown RBP10.21□□□□□ -0.77
LRP1-202ENST00000338962 DNAJB12Q9NXW2 375 aaKnown RBP10.21□□□□□ -0.77
LRP1-202ENST00000338962 DHCR7Q9UBM7 475 aaKnown RBP10.21□□□□□ -0.77
LRP1-202ENST00000338962 OSGIN1Q9UJX0 560 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 CBLCQ9ULV8 474 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 TMEM5Q9Y2B1 443 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 MED31Q9Y3C7 131 aa10.21□□□□□ -0.77
LRP1-202ENST00000338962 MN1Q10571 1320 aaPredicted RBP10.21□□□□□ -0.77
LRP1-202ENST00000338962 UNC13CQ8NB66 2214 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 A0A0B4J2E0 115 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 A0A1B0GX12 115 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 UNC119BA6NIH7 251 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 A8MU76 341 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 KDM4EB2RXH2 506 aaPredicted RBP10.21□□□□□ -0.78
LRP1-202ENST00000338962 H3BMH7 237 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 CHP2O43745 196 aa10.21□□□□□ -0.78
LRP1-202ENST00000338962 CSO75390 466 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms