RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 NID1P14543 1247 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 EIF1P41567 113 aaKnown RBP13.7□□□□□ -0.22
PRKN-201ENST00000338468 SLC6A8P48029 635 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 ATP4BP51164 291 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 STX1BP61266 288 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 TXNL4AP83876 142 aaKnown RBP13.7□□□□□ -0.22
PRKN-201ENST00000338468 PON3Q15166 354 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 GUSBP1Q15486 140 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 GPAT3Q53EU6 434 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 SLC25A53Q5H9E4 307 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 LRRC74BQ6ZQY2 392 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 CHMP1BQ7LBR1 199 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 MSRB3Q8IXL7 192 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 TOR1AIP2Q8NFQ8 470 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 OR10D3Q8NH80 312 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 OIT3Q8WWZ8 545 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 RNASE6Q93091 150 aaKnown RBP13.7□□□□□ -0.22
PRKN-201ENST00000338468 ZNF385DQ9H6B1 395 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 RNF122Q9H9V4 155 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 SLC25A37Q9NYZ2 338 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 SLAMF8Q9P0V8 285 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 LIPT1Q9Y234 373 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 ZNF175Q9Y473 711 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 PCDHB14Q9Y5E9 798 aa13.7□□□□□ -0.22
PRKN-201ENST00000338468 TNFSF11O14788 317 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 ADAM11O75078 769 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 NUDT14O95848 222 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 CSTAP01040 98 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 UBTFL6P0CB48 400 aaPredicted RBP13.69□□□□□ -0.22
PRKN-201ENST00000338468 RPS4Y1P22090 263 aaKnown RBP13.69□□□□□ -0.22
PRKN-201ENST00000338468 ELK4P28324 431 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 ADH6P28332 368 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 UQCRC1P31930 480 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 MAGEA8P43361 318 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 KIR2DL2P43627 348 aaPredicted RBP13.69□□□□□ -0.22
PRKN-201ENST00000338468 EIF1AXP47813 144 aaKnown RBP13.69□□□□□ -0.22
PRKN-201ENST00000338468 QPRTQ15274 297 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 PAGE3Q5JUK9 113 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 C6orf10Q5SRN2 563 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 EIF3MQ7L2H7 374 aaKnown RBP13.69□□□□□ -0.22
PRKN-201ENST00000338468 P4HA3Q7Z4N8 544 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 LILRA2Q8N149 483 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 TMCO5AQ8N6Q1 288 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 OR2V1Q8NHB1 315 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 STARD4Q96DR4 205 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 SPDL1Q96EA4 605 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 MRGPRX4Q96LA9 322 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 THUMPD3Q9BV44 507 aaKnown RBP13.69□□□□□ -0.22
PRKN-201ENST00000338468 ACBD3Q9H3P7 528 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 NPHS2Q9NP85 383 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 CCDC167Q9P0B6 97 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 DCTN4Q9UJW0 460 aa13.69□□□□□ -0.22
PRKN-201ENST00000338468 GPC6Q9Y625 555 aaPredicted RBP13.69□□□□□ -0.22
PRKN-201ENST00000338468 A0A096LPI6 279 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 TRBV5-3A0A0A0MS03 114 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 AGAP5A6NIR3 686 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 EEF1E1-BLOC1S5C9J1V9 151 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 NR5A2O00482 541 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 EEF1E1O43324 174 aaKnown RBP13.68□□□□□ -0.22
PRKN-201ENST00000338468 CXCL13O43927 109 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 CYP7B1O75881 506 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 ANP32DO95626 131 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 CRHP06850 196 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 TFPTP0C1Z6 253 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 ANXA11P50995 505 aaKnown RBP13.68□□□□□ -0.22
PRKN-201ENST00000338468 CCR4P51679 360 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 RPS3AP61247 264 aaKnown RBP13.68□□□□□ -0.22
PRKN-201ENST00000338468 KCNJ10P78508 379 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 CBFBQ13951 182 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 SQLEQ14534 574 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 AGKQ53H12 422 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 LRIF1Q5T3J3 769 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 VWA1Q6PCB0 445 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 ESPNLQ6ZVH7 1005 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 BTLAQ7Z6A9 289 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 SLC38A5Q8WUX1 472 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 CNOT9Q92600 299 aaKnown RBP13.68□□□□□ -0.22
PRKN-201ENST00000338468 KLHL15Q96M94 604 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 TMEM45AQ9NWC5 275 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 KCNN3Q9UGI6 736 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 SLC35A3Q9Y2D2 325 aa13.68□□□□□ -0.22
PRKN-201ENST00000338468 DSPPQ9NZW4 1301 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 A8MXE2 369 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 CGAP01215 116 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 NUDT7P0C024 238 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 NR2F1P10589 423 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 ME2P23368 584 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 SFTPDP35247 375 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 CRATP43155 626 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 SESN3P58005 492 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 DSTNP60981 165 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 HPCAP84074 193 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 RGNQ15493 299 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 SGCBQ16585 318 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 OR2A2Q6IF42 318 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 CGB2Q6NT52 195 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 LUZP2Q86TE4 346 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 LSRQ86X29 649 aaPredicted RBP13.67□□□□□ -0.22
PRKN-201ENST00000338468 C10orf111Q8N326 155 aa13.67□□□□□ -0.22
PRKN-201ENST00000338468 SRXN1Q9BYN0 137 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms