RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CYP7B1O75881 506 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 AGR2O95994 175 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 FESP07332 822 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 BPGMP07738 259 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 NPIPA8P0DM63 369 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 G6PDP11413 515 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 UBL4AP11441 157 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 PRKCAP17252 672 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 PTH2RP49190 550 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 CLDN8P56748 225 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 EMX2Q04743 252 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 P2RY6Q15077 328 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 GPR68Q15743 365 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 ZNF239Q16600 458 aaKnown RBP9.5□□□□□ -0.89
CAPN3-202ENST00000337571 EXOSC6Q5RKV6 272 aaKnown RBP9.5□□□□□ -0.89
CAPN3-202ENST00000337571 SFRP5Q5T4F7 317 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 FCRLAQ7L513 359 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 C6orf120Q7Z4R8 191 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 TUSC5Q8IXB3 177 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 VPS37AQ8NEZ2 397 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 OR5W2Q8NH69 310 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 OR5AK3PQ8NH89 298 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 GPR119Q8TDV5 335 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 RNF128Q8TEB7 428 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 ZFP90Q8TF47 636 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 ABHD3Q8WU67 409 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 TMEM234Q8WY98 164 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 KISS1RQ969F8 398 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-202ENST00000337571 S100PBPQ96BU1 408 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 C3orf30Q96M34 536 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 SDF2Q99470 211 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 GSX2Q9BZM3 304 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 L2HGDHQ9H9P8 463 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 EXD2Q9NVH0 621 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 GPATCH2Q9NW75 528 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 NOP53Q9NZM5 478 aaKnown RBP9.5□□□□□ -0.89
CAPN3-202ENST00000337571 KLHL9Q9P2J3 617 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 KLHL13Q9P2N7 655 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 LGALS13Q9UHV8 139 aa9.5□□□□□ -0.89
CAPN3-202ENST00000337571 SERINC4A6NH21 518 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 HS3ST1O14792 307 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 EFNA2O43921 213 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 CNOT4O95628 575 aaKnown RBP9.49□□□□□ -0.89
CAPN3-202ENST00000337571 AK1P00568 194 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 ADAP00813 363 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 CD3EP07766 207 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 ENPP1P22413 925 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 LOXP28300 417 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-202ENST00000337571 SHC1P29353 583 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 ATP5J2P56134 94 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 RAC3P60763 192 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 HBA1P69905 142 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 PPP2R2BQ00005 443 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 SELENBP1Q13228 472 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 QPRTQ15274 297 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 SMU1Q2TAY7 513 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 NDUFAF6Q330K2 333 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 ATAD3BQ5T9A4 648 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 C16orf62Q7Z3J2 963 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 NUFIP2Q7Z417 695 aaKnown RBP9.49□□□□□ -0.89
CAPN3-202ENST00000337571 RIMKLAQ8IXN7 391 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 CIARTQ8N365 385 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-202ENST00000337571 ZNF611Q8N823 705 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 OR5D16Q8NGK9 328 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 AKAP1Q92667 903 aaKnown RBP eCLIP9.49□□□□□ -0.89
CAPN3-202ENST00000337571 TRMT61AQ96FX7 289 aaKnown RBP9.49□□□□□ -0.89
CAPN3-202ENST00000337571 COX4I2Q96KJ9 171 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 THUMPD3Q9BV44 507 aaKnown RBP9.49□□□□□ -0.89
CAPN3-202ENST00000337571 SRXN1Q9BYN0 137 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 ANKZF1Q9H8Y5 726 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 LAMP3Q9UQV4 416 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 RNF115Q9Y4L5 304 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 KCNE3Q9Y6H6 103 aa9.49□□□□□ -0.89
CAPN3-202ENST00000337571 NUP214P35658 2090 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-202ENST00000337571 A0A1W2PNR3 127 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 WDR91A4D1P6 747 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 TRIM64A6NGJ6 449 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 TRIM64BA6NI03 449 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 LCE2BO14633 110 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 CLOCKO15516 846 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 OIP5O43482 229 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 SNUPNO95149 360 aaKnown RBP9.48□□□□□ -0.89
CAPN3-202ENST00000337571 PLAUP00749 431 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 CSTAP01040 98 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 MYZAPP0CAP1 466 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 PGCP20142 388 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 RPS4XP62701 263 aaKnown RBP9.48□□□□□ -0.89
CAPN3-202ENST00000337571 CSNK2A1P68400 391 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-202ENST00000337571 RASGEF1BQ0VAM2 473 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 ITGADQ13349 1161 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 TSC22D1Q15714 1073 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 TOMM34Q15785 309 aaPredicted RBP9.48□□□□□ -0.89
CAPN3-202ENST00000337571 ARHGAP11BQ3KRB8 267 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 TIGD2Q4W5G0 525 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.48□□□□□ -0.89
CAPN3-202ENST00000337571 PDZK1Q5T2W1 519 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 ANXA8L1Q5VT79 327 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 C3orf33Q6P1S2 294 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 EMBQ6PCB8 327 aa9.48□□□□□ -0.89
CAPN3-202ENST00000337571 TFAP2EQ6VUC0 442 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms