RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CCL5P13501 91 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 CD53P19397 219 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 LCN1P31025 176 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 MNX1P50219 401 aaPredicted RBP21.92■■□□□ 1.1
TSKU-201ENST00000333090 ZNF77Q15935 545 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 HSD17B12Q53GQ0 312 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 CHMP1BQ7LBR1 199 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 ANKRD33Q7Z3H0 272 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 C12orf40Q86WS4 652 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 MS4A15Q8N5U1 240 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 OR2A1Q8NGT9 310 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 THAP4Q8WY91 577 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 COL26A1Q96A83 441 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 HS6ST2Q96MM7 605 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 OR6C2Q9NZP2 312 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 FLVCR2Q9UPI3 526 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 NPFFR2Q9Y5X5 522 aa21.92■■□□□ 1.1
TSKU-201ENST00000333090 CENPVL1A0A0U1RR11 272 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 SLC22A31A6NKX4 558 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 PRG2P13727 222 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 SFRP4Q6FHJ7 346 aaPredicted RBP21.91■■□□□ 1.1
TSKU-201ENST00000333090 MRM1Q6IN84 353 aaKnown RBP21.91■■□□□ 1.1
TSKU-201ENST00000333090 ZNF836Q6ZNA1 936 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 SLC44A3Q8N4M1 653 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 CYB561A3Q8NBI2 242 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 TTLQ8NG68 377 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 ARPC5LQ9BPX5 153 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 C20orf85Q9H1P6 137 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 RDH8Q9NYR8 311 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 WDR45Q9Y484 360 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 A0A0C4DFX4 3053 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 FAM86C2PA6NEL3 165 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 MOSPD3O75425 235 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 TAS2R43P59537 309 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 SLC22A10Q63ZE4 541 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 THSD4Q6ZMP0 1018 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 WDR88Q6ZMY6 472 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 GET4Q7L5D6 327 aaPredicted RBP21.91■■□□□ 1.1
TSKU-201ENST00000333090 SPRED2Q7Z698 418 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 GIMAP5Q96F15 307 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 GSX2Q9BZM3 304 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 CHIAQ9BZP6 476 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 CACYBPQ9HB71 228 aaKnown RBP21.91■■□□□ 1.1
TSKU-201ENST00000333090 FBXL4Q9UKA2 621 aa21.91■■□□□ 1.1
TSKU-201ENST00000333090 LATO43561 262 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 GYPBP06028 91 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 SBK2P0C263 348 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 RAG2P55895 527 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 FNDC3BQ53EP0 1204 aaKnown RBP21.9■■□□□ 1.1
TSKU-201ENST00000333090 TCEAL5Q5H9L2 206 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 FAM111BQ6SJ93 734 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 NLRC3Q7RTR2 1065 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 HAVCR2Q8TDQ0 301 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 PIGKQ92643 395 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 NXPE3Q969Y0 559 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 ERMAPQ96PL5 475 aaPredicted RBP21.9■■□□□ 1.1
TSKU-201ENST00000333090 PRSS27Q9BQR3 290 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 INPP5EQ9NRR6 644 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 ZNF780BQ9Y6R6 833 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 KIAA0100Q14667 2235 aaKnown RBP21.9■■□□□ 1.1
TSKU-201ENST00000333090 A0A1W2PPL8 197 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 GKN3PP0CG01 181 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 UGT2B7P16662 529 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 NAT1P18440 290 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 ATF4P18848 351 aaPredicted RBP21.9■■□□□ 1.1
TSKU-201ENST00000333090 GDNFP39905 211 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 VEGFBP49765 207 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 FOXK2Q01167 660 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 ZNF85Q03923 595 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 KLF9Q13886 244 aaPredicted RBP21.9■■□□□ 1.1
TSKU-201ENST00000333090 LNX2Q8N448 690 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 CXorf40AQ8TE69 158 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 ING5Q8WYH8 240 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 ACTR6Q9GZN1 396 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 ZBP1Q9H171 429 aa21.9■■□□□ 1.1
TSKU-201ENST00000333090 MDC1Q14676 2089 aaKnown RBP21.9■■□□□ 1.1
TSKU-201ENST00000333090 G3V3Q6 166 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 EPXP11678 715 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 IL9P15248 144 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 ERVFC1P60507 584 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 TSPAN5P62079 268 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 GPR68Q15743 365 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 ERN2Q76MJ5 926 aaKnown RBP21.89■■□□□ 1.1
TSKU-201ENST00000333090 KANSL1Q7Z3B3 1105 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 RAB42Q8N4Z0 105 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 TOR1AIP2Q8NFQ8 470 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 OR8D1Q8WZ84 308 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 COX14Q96I36 57 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 DDOQ99489 341 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 TBX21Q9UL17 535 aa21.89■■□□□ 1.1
TSKU-201ENST00000333090 MAGEB4O15481 346 aaPredicted RBP21.89■■□□□ 1.09
TSKU-201ENST00000333090 PEX14O75381 377 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 ZNF136P52737 540 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 BLVRAP53004 296 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 DHCR24Q15392 516 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 ZIC1Q15915 447 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 SSX6Q7RTT6 188 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 HDDC2Q7Z4H3 204 aa21.89■■□□□ 1.09
TSKU-201ENST00000333090 GRAMD2AQ8IUY3 354 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms