RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 OCIAD1Q9NX40 245 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 GPR52Q9Y2T5 361 aa13.73□□□□□ -0.21
TPM3-205ENST00000328159 SNTNA6NMZ2 147 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 EFCAB9A8MZ26 197 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 D6RAR5 112 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 TO15178 435 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 PRODHO43272 600 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 RFPL3O75679 317 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 RCBTB2O95199 551 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 ONECUT2O95948 504 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 CH25HO95992 272 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 HMGN1P05114 100 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 HEXBP07686 556 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 SP9P0CG40 484 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 TBXA2RP21731 343 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 LCN1P31025 176 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 NR0B1P51843 470 aaKnown RBP13.72□□□□□ -0.21
TPM3-205ENST00000328159 FOXL2P58012 376 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 COPZ1P61923 177 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 CD226Q15762 336 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 ZNF528Q3MIS6 628 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 RPL13AP3Q6NVV1 102 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 HSDL2Q6YN16 418 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 PPP1R3BQ86XI6 285 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 CACTIN-AS1Q8N1I8 211 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 ANKK1Q8NFD2 765 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 OR52L1Q8NGH7 329 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 OR13C2Q8NGS9 318 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 NRSN2Q9GZP1 204 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 UBQLN3Q9H347 655 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 SMOC1Q9H4F8 434 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 IL20RAQ9UHF4 553 aa13.72□□□□□ -0.21
TPM3-205ENST00000328159 NTN3O00634 580 aaPredicted RBP13.71□□□□□ -0.21
TPM3-205ENST00000328159 SLC22A1O15245 554 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 OIP5O43482 229 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 REM1O75628 298 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 SAGP10523 405 aaPredicted RBP13.71□□□□□ -0.21
TPM3-205ENST00000328159 UBL4AP11441 157 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 GRK5P34947 590 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 GPR143P51810 404 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 FXYD6P3P58550 94 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 RNLSQ5VYX0 342 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 ZNF385CQ66K41 422 aaPredicted RBP13.71□□□□□ -0.21
TPM3-205ENST00000328159 OVCH1Q7RTY7 1134 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 SLC46A3Q7Z3Q1 461 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 ANKRD37Q7Z713 158 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 OR52I1Q8NGK6 324 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 PHOSPHO1Q8TCT1 267 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 DNAJA4Q8WW22 397 aaPredicted RBP13.71□□□□□ -0.21
TPM3-205ENST00000328159 ADOQ96SZ5 270 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 APMAPQ9HDC9 416 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 NCOR1O75376 2440 aa13.71□□□□□ -0.21
TPM3-205ENST00000328159 IGHV3-20A0A0C4DH32 117 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 CDC14CA4D256 554 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 IDSB3KWA1 339 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 TSPAN2O60636 221 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 ICOSLGO75144 302 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 RAB36O95755 333 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 NGFRP08138 427 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 FGF5P12034 268 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 BMP7P18075 431 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 IL12BP29460 328 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 SKP2Q13309 424 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 TRA2AQ13595 282 aaKnown RBP eCLIP13.71□□□□□ -0.224e-13■■■■□ 25.8
TPM3-205ENST00000328159 MED22Q15528 200 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 TMEM44Q2T9K0 475 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 KLHL22Q53GT1 634 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 ARMCX4Q5H9R4 360 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 SMARCD3Q6STE5 483 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 APOOLQ6UXV4 268 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.22
TPM3-205ENST00000328159 SLC34A3Q8N130 599 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 ZNF441Q8N8Z8 693 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 RNFT2Q96EX2 444 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 OR5M11Q96RB7 305 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 EXOSC3Q9NQT5 275 aaKnown RBP13.71□□□□□ -0.22
TPM3-205ENST00000328159 MRPS18AQ9NVS2 196 aaKnown RBP13.71□□□□□ -0.22
TPM3-205ENST00000328159 DIMT1Q9UNQ2 313 aaKnown RBP13.71□□□□□ -0.22
TPM3-205ENST00000328159 ERGIC3Q9Y282 383 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 SIGLEC7Q9Y286 467 aa13.71□□□□□ -0.22
TPM3-205ENST00000328159 A0A087WUJ7 227 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 IRGMA1A4Y4 181 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 GTPBP1O00178 669 aaKnown RBP13.7□□□□□ -0.22
TPM3-205ENST00000328159 BHLHE40O14503 412 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 HCN1O60741 890 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 ALOX12BO75342 701 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 PTP4A3O75365 173 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 CDK4P11802 303 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 GAS1P54826 345 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 VBP1P61758 197 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 LSM3P62310 102 aaKnown RBP13.7□□□□□ -0.22
TPM3-205ENST00000328159 PLCXD2Q0VAA5 305 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 AADACL4Q5VUY2 407 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 DESI1Q6ICB0 168 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 METTL21AQ8WXB1 218 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 RPL3LQ92901 407 aaKnown RBP13.7□□□□□ -0.22
TPM3-205ENST00000328159 C3orf49Q96BT1 292 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 LGALS12Q96DT0 336 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 HSPBAP1Q96EW2 488 aa13.7□□□□□ -0.22
TPM3-205ENST00000328159 MGLLQ99685 303 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms