RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ZNF552Q9H707 407 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 RPS6KB2Q9UBS0 482 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 SLC7A7Q9UM01 511 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 HRH3Q9Y5N1 445 aa9.35□□□□□ -0.91
VIPAS39-201ENST00000327028 FREM2Q5SZK8 3169 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 ARRDC5A6NEK1 342 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 SOCS2O14508 198 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 WDPCPO95876 746 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 PGCP20142 388 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 CD96P40200 585 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 CCL11P51671 97 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 TLE3Q04726 772 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 SWT1Q5T5J6 900 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 WBP2NLQ6ICG8 309 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 PPP4R4Q6NUP7 873 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 ZBTB49Q6ZSB9 765 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 MDGA2Q7Z553 956 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 STK32CQ86UX6 486 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 OSBPL10Q9BXB5 764 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 VCXQ9H320 206 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 COQ10BQ9H8M1 238 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 PROK2Q9HC23 129 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 TIMMDC1Q9NPL8 285 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 LRFN1Q9P244 771 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 TMCC3Q9ULS5 477 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 IGF2RP11717 2491 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 C2orf72A6NCS6 295 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 PDLIM1O00151 329 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 EI24O14681 340 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 CHP2O43745 196 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 NEURL1O76050 574 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 CCNB2O95067 398 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 SNX4O95219 450 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 P04436 131 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 IDH2P48735 452 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 LAPTM4AQ15012 233 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 MICAQ29983 383 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 DCST1Q5T197 706 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 TBPL2Q6SJ96 375 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 HS3ST5Q8IZT8 346 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 CADM2Q8N3J6 435 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 FADS6Q8N9I5 356 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 PSD4Q8NDX1 1056 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 SLC7A13Q8TCU3 470 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 GIPC3Q8TF64 312 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 TMEM41AQ96HV5 264 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 BARD1Q99728 777 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 KLHDC3Q9BQ90 382 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 USE1Q9NZ43 259 aa9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 PDP1Q9P0J1 537 aaPredicted RBP9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 MAGED1Q9Y5V3 778 aaPredicted RBP9.34□□□□□ -0.91
VIPAS39-201ENST00000327028 EML6Q6ZMW3 1958 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 OR5H15A6NDH6 313 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 B4DXG7 233 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 SNPHO15079 494 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 HPRP00739 348 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF26P17031 533 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 MST1P26927 711 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 ITPKBP27987 946 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 DAG1Q14118 895 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 SEC23BQ15437 767 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 OR1C1Q15619 314 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 ULK3Q6PHR2 472 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 MDS2Q8NDY4 140 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 FDCSPQ8NFU4 85 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 OR2M3Q8NG83 312 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 OR10G2Q8NGC3 310 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF563Q8TA94 476 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 GPR119Q8TDV5 335 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 DNAJA4Q8WW22 397 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 SLC38A4Q969I6 547 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 C3orf49Q96BT1 292 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 DCBLD2Q96PD2 775 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 SLC29A1Q99808 456 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 RBM4BQ9BQ04 359 aaKnown RBP9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 PRSS27Q9BQR3 290 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 RBM4Q9BWF3 364 aaKnown RBP9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 SELENONQ9NZV5 590 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 SH3PXD2BA1X283 911 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 GMFGO60234 142 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 TRIM3O75382 744 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 NUDT14O95848 222 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 SLC1A3P43003 542 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 ALDH3A2P51648 485 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 UCNP55089 124 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 PPP2R2BQ00005 443 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 QPRTQ15274 297 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 ALG10BQ5I7T1 473 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 OTUD3Q5T2D3 398 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 OR5M10Q6IEU7 315 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 FAHD1Q6P587 224 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 PODNL1Q6PEZ8 512 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 IGFL2Q6UWQ7 119 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 LRRC69Q6ZNQ3 347 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 PLCZ1Q86YW0 608 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 NKAIN4Q8IVV8 208 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 LINC00471Q8N535 108 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 WDSUB1Q8N9V3 476 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 OR4K17Q8NGC6 315 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms