RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 FGF9P31371 208 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 CENPAP49450 140 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 ERVK-21P61565 698 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 RPS21P63220 83 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 ABATP80404 500 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 SRSF5Q13243 272 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 DUSP6Q16828 381 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 LYPD4Q6UWN0 246 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 POGLUT1Q8NBL1 392 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 SMPDL3BQ92485 455 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 GHSRQ92847 366 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 TNFRSF13CQ96RJ3 184 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 SDF2Q99470 211 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 GAL3ST1Q99999 423 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 FUZQ9BT04 418 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 HDAC8Q9BY41 377 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 DPAGT1Q9H3H5 408 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 PPP1R3EQ9H7J1 279 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 LYARQ9NX58 379 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 EIF3KQ9UBQ5 218 aaKnown RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 OR10H1Q9Y4A9 318 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 EDNRAP25101 427 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 PRKAR1BP31321 381 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 CLDN12P56749 244 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 FOXK2Q01167 660 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 NIPAL3Q6P499 406 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 ELMOD2Q8IZ81 293 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 TEX13CA0A0J9YWL9 993 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 GXYLT2A0PJZ3 443 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 THY1P04216 161 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 RAB3BP20337 219 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF10P21506 573 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 STOMP27105 288 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF81P51508 661 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 GPM6BQ13491 265 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 FGFBP1Q14512 234 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 HES5Q5TA89 166 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 ZNF776Q68DI1 518 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 METTL27Q8N6F8 245 aaPredicted RBP11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 OR52N1Q8NH53 320 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 ARHGDIGQ99819 225 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 MED18Q9BUE0 208 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 MENTQ9BUN1 341 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 TMEM168Q9H0V1 697 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 NT5DC2Q9H857 520 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 CACNG2Q9Y698 323 aa11.97□□□□□ -0.49
HMGCS1-201ENST00000325110 LINC01553A4QN01 128 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 OR2W5A6NFC9 320 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 URADA6NGE7 173 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 SLC22A31A6NKX4 558 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 IFNGP01579 166 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 CA3P07451 260 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 IGFALSP35858 605 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 SOX2P48431 317 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 RPL6Q02878 288 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 MLC1Q15049 377 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 ABHD4Q8TB40 342 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 DNAJA4Q8WW22 397 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 CNOT9Q92600 299 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 GAL3ST3Q96A11 431 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 TEAD3Q99594 435 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 PDCD1LG2Q9BQ51 273 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 LMAN2LQ9H0V9 348 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 THAP10Q9P2Z0 257 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 PHF11Q9UIL8 331 aa11.96□□□□□ -0.49
HMGCS1-201ENST00000325110 ZSCAN5BA6NJL1 495 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 FZD7O75084 574 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 ZNF780AO75290 641 aaPredicted RBP11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 PEBP1P30086 187 aaKnown RBP11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 ALG10BQ5I7T1 473 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 HBMQ6B0K9 141 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 VN1R4Q7Z5H5 301 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 MFSD9Q8NBP5 474 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 OR5J2Q8NH18 312 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 OR8K3Q8NH51 312 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 KIAA1143Q96AT1 154 aaPredicted RBP11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 POLHQ9Y253 713 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 DENND4CQ5VZ89 1909 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 BRWD1Q9NSI6 2320 aa11.96□□□□□ -0.5
HMGCS1-201ENST00000325110 P2RX6O15547 441 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 FLRT2O43155 660 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ALX3O95076 343 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 CPMP14384 443 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 MAGEB1P43366 347 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 GAS1P54826 345 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 TNFRSF17Q02223 184 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 RUNX2Q13950 521 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 AMZ1Q400G9 498 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 FIGLAQ6QHK4 219 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 WDR88Q6ZMY6 472 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 LRRC28Q86X40 367 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 SUN5Q8TC36 379 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 ORAI3Q9BRQ5 295 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 DPCDQ9BVM2 203 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 TEX101Q9BY14 249 aa11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 PITHD1Q9GZP4 211 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-201ENST00000325110 MRPS2Q9Y399 296 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms