RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 EVX1P49640 407 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 TAS2R43P59537 309 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 PPP1CAP62136 330 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 PSG6Q00889 435 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 DGAT2L6Q6ZPD8 337 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 RTL4Q6ZR62 310 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 SFTPA2Q8IWL1 248 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 LSMEM1Q8N8F7 131 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 GRHL3Q8TE85 626 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 NDC1Q9BTX1 674 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 HCAR1Q9BXC0 346 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 GPR27Q9NS67 375 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 HAO2Q9NYQ3 351 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 FLRT3Q9NZU0 649 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 PCDHGB7Q9Y5F8 929 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 LINC00854A0A1B0GVQ3 168 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 SHISA3A0PJX4 238 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 HTR3EA5X5Y0 456 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 HPGDSO60760 199 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 IFNGP01579 166 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 SLC6A6P31641 620 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 RPS7P62081 194 aaKnown RBP20.65■□□□□ 0.9
PNKP-201ENST00000322344 FZD2Q14332 565 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 B3GLCTQ6Y288 498 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 ZNF550Q7Z398 422 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 C19orf47Q8N9M1 422 aaKnown RBP20.65■□□□□ 0.9
PNKP-201ENST00000322344 OR10H4Q8NGA5 316 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 AHCYL2Q96HN2 611 aaKnown RBP20.65■□□□□ 0.9
PNKP-201ENST00000322344 PHOX2BQ99453 314 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 TIMP4Q99727 224 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 RNF32Q9H0A6 362 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 NEK6Q9HC98 313 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 FAM60AQ9NP50 221 aa20.65■□□□□ 0.9
PNKP-201ENST00000322344 DNAJB12Q9NXW2 375 aaKnown RBP20.65■□□□□ 0.9
PNKP-201ENST00000322344 MRPS33Q9Y291 106 aaKnown RBP20.65■□□□□ 0.9
PNKP-201ENST00000322344 ZC3H12DA2A288 527 aaKnown RBP20.64■□□□□ 0.89
PNKP-201ENST00000322344 MEIOCA2RUB1 952 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 THEGLP0DJG4 465 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 SLC2A2P11168 524 aaPredicted RBP20.64■□□□□ 0.89
PNKP-201ENST00000322344 RNH1P13489 461 aaKnown RBP20.64■□□□□ 0.89
PNKP-201ENST00000322344 BLKP51451 505 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 ACTC1P68032 377 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 ACTA1P68133 377 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 POU4F2Q12837 409 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 ZNF542PQ5EBM4 170 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 TRIQKQ629K1 86 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 ARHGAP11AQ6P4F7 1023 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 MCATQ8IVS2 390 aaKnown RBP20.64■□□□□ 0.89
PNKP-201ENST00000322344 ZNF614Q8N883 585 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 C19orf18Q8NEA5 215 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 ADAMTS18Q8TE60 1221 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 LRFN5Q96NI6 719 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 F5P12259 2224 aa20.64■□□□□ 0.89
PNKP-201ENST00000322344 TRAV27A0A087WT01 109 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 C2orf92A0A1B0GVN3 265 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 HMX3A6NHT5 357 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 HCRTR1O43613 425 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 SBK2P0C263 348 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 PEPDP12955 493 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 SLC2A5P22732 501 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 NUDT1P36639 197 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 DDOSTP39656 456 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 ACAA2P42765 397 aaKnown RBP20.63■□□□□ 0.89
PNKP-201ENST00000322344 RFX3P48380 749 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 EMDP50402 254 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 PSMD4P55036 377 aaKnown RBP20.63■□□□□ 0.89
PNKP-201ENST00000322344 GAS6Q14393 721 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 PRTGQ2VWP7 1150 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 OAFQ86UD1 273 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 ZNF761Q86XN6 746 aaPredicted RBP20.63■□□□□ 0.89
PNKP-201ENST00000322344 OR51A7Q8NH64 312 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 OR5W2Q8NH69 310 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 ZDHHC1Q8WTX9 485 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 RIT1Q92963 219 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 ZNF486Q96H40 463 aaPredicted RBP20.63■□□□□ 0.89
PNKP-201ENST00000322344 TBX5Q99593 518 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 OR51V1Q9H2C8 321 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 CAPN10Q9HC96 672 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 NDRG2Q9UN36 371 aaKnown RBP20.63■□□□□ 0.89
PNKP-201ENST00000322344 CTNSO60931 367 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 RFPL3O75679 317 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 NCR1O76036 304 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 TYRP1P17643 537 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 APEX1P27695 318 aaKnown RBP20.63■□□□□ 0.89
PNKP-201ENST00000322344 CCINQ13939 588 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 ZNF141Q15928 474 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 ALG10BQ5I7T1 473 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 ZNF362Q5T0B9 420 aaPredicted RBP20.63■□□□□ 0.89
PNKP-201ENST00000322344 ZNF438Q7Z4V0 828 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 GATAD2AQ86YP4 633 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 ZNF595Q8IYB9 648 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 Q8N402 240 aa20.63■□□□□ 0.89
PNKP-201ENST00000322344 RBM18Q96H35 190 aaKnown RBP20.63■□□□□ 0.89
PNKP-201ENST00000322344 PLA2G10O15496 165 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 PLPP2O43688 288 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 SRPX2O60687 465 aaPredicted RBP20.62■□□□□ 0.89
PNKP-201ENST00000322344 REM1O75628 298 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 PPP1R3DO95685 299 aa20.62■□□□□ 0.89
PNKP-201ENST00000322344 IGLV3-21P80748 117 aaPredicted RBP20.62■□□□□ 0.89
PNKP-201ENST00000322344 STX4Q12846 297 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms