RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 BLOC1S5-TXNDC5H3BN57 136 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CLDN4O14493 209 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 EGFP01133 1207 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 GDNFP39905 211 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RPE65Q16518 533 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 OR2A14Q96R47 310 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 FIZ1Q96SL8 496 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 NTMT1Q9BV86 223 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZDHHC5Q9C0B5 715 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 OR11A1Q9GZK7 315 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 MCOLN1Q9GZU1 580 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SLCO5A1Q9H2Y9 848 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 DIMT1Q9UNQ2 313 aaKnown RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SNX11Q9Y5W9 270 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SGK494L7N484 410 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF195O14628 629 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 AHCYP23526 432 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CCKBRP32239 447 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 NAA10P41227 235 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RNF144AP50876 292 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SLC6A19Q695T7 634 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TBPL2Q6SJ96 375 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 UNC5DQ6UXZ4 953 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF679Q8IYX0 411 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 OR4K17Q8NGC6 315 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 OR52I1Q8NGK6 324 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF417Q8TAU3 575 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CERKQ8TCT0 537 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SAMD10Q9BYL1 202 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TAS2R16Q9NYV7 291 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 VSX1Q9NZR4 365 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 A0A0A6YYH2 397 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 A6NJ64 397 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CXCL11O14625 94 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 NR2C1P13056 603 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TAS2R46P59540 309 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RNF151Q2KHN1 245 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZMAT1Q5H9K5 638 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SLC18B1Q6NT16 456 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 FBXO22Q8NEZ5 403 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 KCTD3Q9Y597 815 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM200CA6NKL6 621 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 BPNT1O95861 308 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TNFRSF1BP20333 461 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ADCYAP1R1P41586 468 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RAP1AP62834 184 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SMAD3P84022 425 aaKnown RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM220Q6QAJ8 160 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TAS1R3Q7RTX0 852 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 NANPQ8TBE9 248 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 UCN3Q969E3 161 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 A0A1B0GV50 99 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM129A0AVI4 362 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ARRDC5A6NEK1 342 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 KIAA0355O15063 1070 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CDC123O75794 336 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TFPIP10646 304 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF30P17039 623 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CNR1P21554 472 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SORDQ00796 357 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ILKQ13418 452 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 GPR176Q14439 515 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SDHAF4Q5VUM1 108 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 FBXL22Q6P050 247 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 KIAA1324Q6UXG2 1013 aaKnown RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CBLL1Q75N03 491 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SLC29A4Q7RTT9 530 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SLC35F2Q8IXU6 374 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 OR4E2Q8NGC2 313 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 OR4K5Q8NGD3 323 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 PCNPQ8WW12 178 aaKnown RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RAB39BQ96DA2 213 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SRRQ9GZT4 340 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF701Q9NV72 531 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 PCYT1BQ9Y5K3 369 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF705FA8MVS1 300 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TSPAN12O95859 305 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF705DP0CH99 300 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF705BP0CI00 300 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 LAMP1P11279 417 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SLC2A5P22732 501 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 PPT1P50897 306 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF91Q05481 1191 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 ACSM3Q53FZ2 586 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CARD16Q5EG05 197 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 C6orf120Q7Z4R8 191 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 CMIPQ8IY22 773 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 RAB8BQ92930 207 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SLAMF9Q96A28 289 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 LDAHQ9H6V9 325 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 SYNPO2LQ9H987 977 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 MARCH4Q9P2E8 410 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TRBV4-1A0A0J9YWV2 114 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 A0A1B0GTW7 788 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 TLX3O43711 291 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 MAT2AP31153 395 aaKnown RBP6.64□□□□□ -1.35
SMC1A-201ENST00000322213 PRKCZQ05513 592 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 MBTPS1Q14703 1052 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 DCST2Q5T1A1 773 aa6.64□□□□□ -1.35
SMC1A-201ENST00000322213 GPR139Q6DWJ6 353 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms