RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 LIMS3P0CW19 117 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 LIMS4P0CW20 117 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 CD46P15529 392 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 TBXA2RP21731 343 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 ATP12AP54707 1039 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 SERTAD2Q14140 314 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 NXNL2Q5VZ03 156 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 FCRLBQ6BAA4 426 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 TSSK4Q6SA08 328 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 TMPRSS11FQ6ZWK6 438 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 CXXC5Q7LFL8 322 aaKnown RBP6.98□□□□□ -1.29
IFT88-201ENST00000319980 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 PLXDC1Q8IUK5 500 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 GRAMD2AQ8IUY3 354 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 CLDN22Q8N7P3 220 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 ZNF321PQ8N8H1 164 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 ZNF615Q8N8J6 731 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 CHPT1Q8WUD6 406 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 COX4I2Q96KJ9 171 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 MED20Q9H944 212 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 FGF20Q9NP95 211 aaPredicted RBP6.98□□□□□ -1.29
IFT88-201ENST00000319980 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.98□□□□□ -1.29
IFT88-201ENST00000319980 MED17Q9NVC6 651 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 ETAA1Q9NY74 926 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 SEC14L4Q9UDX3 406 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 SIGLEC7Q9Y286 467 aa6.98□□□□□ -1.29
IFT88-201ENST00000319980 K7ESF4 209 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 DUX1O43812 170 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 RCBTB2O95199 551 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 NGFRP08138 427 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 FOLR1P15328 257 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 GLB1P16278 677 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 RPS19P39019 145 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 CD79BP40259 229 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 SLC16A1P53985 500 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.97□□□□□ -1.29
IFT88-201ENST00000319980 FGFBP1Q14512 234 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 ZNF141Q15928 474 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 WDR45BQ5MNZ6 344 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 OAFQ86UD1 273 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 PRSS58Q8IYP2 241 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 GPR135Q8IZ08 494 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 ZFP41Q8N8Y5 198 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 GATSQ8NAP1 163 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 PTPMT1Q8WUK0 201 aaPredicted RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 SNRNP27Q8WVK2 155 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 TSLPQ969D9 159 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 CLDN23Q96B33 292 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 C1GALT1C1Q96EU7 318 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 ZNF578Q96N58 590 aaPredicted RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 SECISBP2Q96T21 854 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 KCNS3Q9BQ31 491 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 TRIM2Q9C040 744 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 OR8D2Q9GZM6 311 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 CHRNA10Q9GZZ6 450 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 RACGAP1Q9H0H5 632 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 LANCL2Q9NS86 450 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 QPCTLQ9NXS2 382 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 CCDC59Q9P031 241 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 DAPK2Q9UIK4 370 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 STUB1Q9UNE7 303 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 SSR3Q9UNL2 185 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 YARS2Q9Y2Z4 477 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 CLCA3PQ9Y6N3 262 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 TMEM129A0AVI4 362 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 ZC3H12DA2A288 527 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 NPIPB9F8W1W9 429 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 H3BMH7 237 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 PLD2O14939 933 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 CPEP16870 476 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 ENDOUP21128 410 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 PAICSP22234 425 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 NOS3P29474 1203 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 HTR1FP30939 366 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 SLC1A3P43003 542 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 PPP5CP53041 499 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 FOXK2Q01167 660 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 MXD1Q05195 221 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 CRYZQ08257 329 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 TRIM16LQ309B1 348 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 KLHL12Q53G59 568 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 VWA2Q5GFL6 755 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 MED25Q71SY5 747 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 ZNF550Q7Z398 422 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 LNX2Q8N448 690 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 LSMEM1Q8N8F7 131 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 OR51G2Q8NGK0 314 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 OR1L3Q8NH93 324 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 TNFRSF13CQ96RJ3 184 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 TM9SF2Q99805 663 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 HCAR1Q9BXC0 346 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 SNTG1Q9NSN8 517 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 FAIMQ9NVQ4 179 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 TOR4AQ9NXH8 423 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 RPS6KB2Q9UBS0 482 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 PRODH2Q9UF12 536 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 GMEB2Q9UKD1 530 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 TMEM5Q9Y2B1 443 aa6.97□□□□□ -1.29
IFT88-201ENST00000319980 EXOSC1Q9Y3B2 195 aaKnown RBP6.97□□□□□ -1.29
IFT88-201ENST00000319980 A3GALT2U3KPV4 340 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms