RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 HSD11B1LQ7Z5J1 315 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 GRASPQ7Z6J2 395 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF546Q86UE3 836 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 NUP43Q8NFH3 380 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 OR52E4Q8NGH9 312 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 PDLIM5Q96HC4 596 aaKnown RBP7.04□□□□□ -1.28
CDHR3-201ENST00000317716 LRIG1Q96JA1 1093 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 DPH7Q9BTV6 452 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 C1QTNF7Q9BXJ2 289 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 ATG5Q9H1Y0 275 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 HRH4Q9H3N8 390 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 DMRT3Q9NQL9 472 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 KLHL9Q9P2J3 617 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 SPACA6W5XKT8 324 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 SEC16AO15027 2179 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 COL6A3P12111 3177 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 QSOX1O00391 747 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 EIF1AYO14602 144 aaKnown RBP7.04□□□□□ -1.28
CDHR3-201ENST00000317716 TPPPO94811 219 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 VNN2O95498 520 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 EGFP01133 1207 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 EPCAMP16422 314 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 PSMB1P20618 241 aaKnown RBP7.04□□□□□ -1.28
CDHR3-201ENST00000317716 HOXC13P31276 330 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 TLX1P31314 330 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-201ENST00000317716 MPIP34949 423 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 NUDT1P36639 197 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 RPL34P49207 117 aaKnown RBP7.04□□□□□ -1.28
CDHR3-201ENST00000317716 PFN3P60673 137 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 SIM1P81133 766 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-201ENST00000317716 ACVR1Q04771 509 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 SP140Q13342 867 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 KIAA0040Q15053 153 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 PLEKHS1Q5SXH7 462 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF783Q6ZMS7 281 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 TMPRSS9Q7Z410 1059 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 NKAIN4Q8IVV8 208 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 GPALPP1Q8IXQ4 340 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 C9orf62Q8N4C0 152 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 OR56B4Q8NH76 319 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 SYNPRQ8TBG9 265 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 THAP4Q8WY91 577 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 SMPDL3BQ92485 455 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 UCN3Q969E3 161 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 TRIB3Q96RU7 358 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 PARP12Q9H0J9 701 aaKnown RBP7.04□□□□□ -1.28
CDHR3-201ENST00000317716 P2RY12Q9H244 342 aa7.04□□□□□ -1.28
CDHR3-201ENST00000317716 TRIOO75962 3097 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 KNTC1P50748 2209 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 LINC01553A4QN01 128 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PPM1DO15297 605 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 CDC123O75794 336 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 AMY2AP04746 511 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 RPN2P04844 631 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PGAM2P15259 253 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 POU3F2P20265 443 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ACHEP22303 614 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 DDX6P26196 483 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 CCR8P51685 355 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PGDP52209 483 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 DSC1Q08554 894 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ST3GAL2Q16842 350 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 TUSC1Q2TAM9 212 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 NXPE4Q6UWF7 544 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 NHLRC1Q6VVB1 395 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 AMZ2Q86W34 360 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 STX12Q86Y82 276 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PRSS58Q8IYP2 241 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 GTPBP8Q8N3Z3 284 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 DNAAF1Q8NEP3 725 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 OR6N2Q8NGY6 317 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 OR52I2Q8NH67 350 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF461Q8TAF7 563 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 CHFRQ96EP1 664 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 GAS2L1Q99501 681 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 FN3KQ9H479 309 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 EMC7Q9NPA0 242 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 LHX3Q9UBR4 397 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 KLK11Q9UBX7 282 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ATXN7L1Q9ULK2 861 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 LALBAP00709 142 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 HIST1H2ABP04908 130 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 IMPA1P29218 277 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PNLIPRP1P54315 467 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 RING1Q06587 406 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PUM1Q14671 1186 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 PAN3Q58A45 887 aaKnown RBP7.03□□□□□ -1.28
CDHR3-201ENST00000317716 HIST3H2AQ7L7L0 130 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 CD163Q86VB7 1156 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ATCAYQ86WG3 371 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 OR11H7Q8NGC8 314 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 OR13C2Q8NGS9 318 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 OR9A2Q8NGT5 310 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 HIST1H2ACQ93077 130 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 GLYATL1Q969I3 302 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 SLC25A36Q96CQ1 311 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 EID2BQ96D98 161 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 SLC41A3Q96GZ6 507 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 NRTNQ99748 197 aa7.03□□□□□ -1.28
CDHR3-201ENST00000317716 ATF6BQ99941 703 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms