RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TRPC5OSA6NMA1 111 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 E9PBE3 544 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 EFNA2O43921 213 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 SCN2BO60939 215 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 CYP7B1O75881 506 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 PRKD3O94806 890 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 CSTAP01040 98 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 FOSL1P15407 271 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 CCKARP32238 428 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 CHI3L1P36222 383 aaPredicted RBP15.86■□□□□ 0.13
TPM1-203ENST00000317516 ADAM8P78325 824 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 CASP8Q14790 479 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 QPRTQ15274 297 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 TOMM34Q15785 309 aaPredicted RBP15.86■□□□□ 0.13
TPM1-203ENST00000317516 ZNF239Q16600 458 aaKnown RBP15.86■□□□□ 0.13
TPM1-203ENST00000317516 NDUFAF6Q330K2 333 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 HEPHL1Q6MZM0 1159 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 STAC2Q6ZMT1 411 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 SPATA19Q7Z5L4 167 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 TRIML2Q8N7C3 387 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 RNF128Q8TEB7 428 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 ZFP90Q8TF47 636 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 TACO1Q9BSH4 297 aaKnown RBP15.86■□□□□ 0.13
TPM1-203ENST00000317516 THUMPD3Q9BV44 507 aaKnown RBP15.86■□□□□ 0.13
TPM1-203ENST00000317516 HDHD5Q9BXW7 423 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 ZNF350Q9GZX5 532 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 OR10A4Q9H209 315 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 SERHL2Q9H4I8 314 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 WDR45Q9Y484 360 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 C2CD3Q4AC94 2353 aa15.86■□□□□ 0.13
TPM1-203ENST00000317516 A0A1W2PPR1 153 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 ESPNB1AK53 854 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 SLCO1B7G3V0H7 640 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 ANKRD28O15084 1053 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 ARHGEF9O43307 516 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 UGT2B17O75795 530 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 NTN1O95631 604 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 OR12D1P0DN82 309 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 PGCP20142 388 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 SHC1P29353 583 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 AGTR1P30556 359 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 ANXA11P50995 505 aaKnown RBP15.85■□□□□ 0.13
TPM1-203ENST00000317516 RAC3P60763 192 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 TXNL4AP83876 142 aaKnown RBP15.85■□□□□ 0.13
TPM1-203ENST00000317516 LRRC74AQ0VAA2 488 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 FOXD4Q12950 439 aaPredicted RBP15.85■□□□□ 0.13
TPM1-203ENST00000317516 FAM174BQ3ZCQ3 159 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 SPANXN4Q5MJ08 99 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 SHEQ5VZ18 495 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 ATG16L1Q676U5 607 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 FCRLAQ7L513 359 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 ST8SIA1Q92185 356 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 NEURL3Q96EH8 262 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 ZBTB18Q99592 522 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 PIP5K1AQ99755 562 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 C12orf49Q9H741 205 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 MARCOQ9UEW3 520 aaPredicted RBP15.85■□□□□ 0.13
TPM1-203ENST00000317516 BTNL2Q9UIR0 455 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 SLC35A3Q9Y2D2 325 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 PCNX3Q9H6A9 2034 aa15.85■□□□□ 0.13
TPM1-203ENST00000317516 TMEM120BA0PK00 339 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 ETV2O00321 342 aaPredicted RBP15.84■□□□□ 0.13
TPM1-203ENST00000317516 HDAC3O15379 428 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 ERLIN1O75477 346 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 YES1P07947 543 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 UBTFL6P0CB48 400 aaPredicted RBP15.84■□□□□ 0.13
TPM1-203ENST00000317516 PSMB1P20618 241 aaKnown RBP15.84■□□□□ 0.13
TPM1-203ENST00000317516 KHKP50053 298 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 NR1H2P55055 460 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 CASP9P55211 416 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 PHC1P78364 1004 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 NKX6-1P78426 367 aaPredicted RBP15.84■□□□□ 0.13
TPM1-203ENST00000317516 HPCAP84074 193 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 SKP2Q13309 424 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 ACKR1Q16570 336 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 TIGD2Q4W5G0 525 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 BEX5Q5H9J7 111 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 AP1ARQ63HQ0 302 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 SAXO2Q658L1 398 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 C3orf33Q6P1S2 294 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 TNFAIP8L2Q6P589 184 aaPredicted RBP15.84■□□□□ 0.13
TPM1-203ENST00000317516 STEAP2Q8NFT2 490 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 ABHD3Q8WU67 409 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 RAB8BQ92930 207 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 ZBTB9Q96C00 473 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 ROPN1LQ96C74 230 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 CCDC115Q96NT0 180 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 SLC35A5Q9BS91 424 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 SRXN1Q9BYN0 137 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 NKIRAS1Q9NYS0 192 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 KLHL9Q9P2J3 617 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 KLHL13Q9P2N7 655 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 KCNE5Q9UJ90 142 aa15.84■□□□□ 0.13
TPM1-203ENST00000317516 SIAH2O43255 324 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 KIAA0513O60268 411 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 DNAJA2O60884 412 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 SMPD2O60906 423 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 FKBP2P26885 142 aaKnown RBP15.83■□□□□ 0.12
TPM1-203ENST00000317516 HOXC12P31275 282 aa15.83■□□□□ 0.12
TPM1-203ENST00000317516 SLC18A1P54219 525 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms