RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SLC1A3P43003 542 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 MXD1Q05195 221 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 DEFB110Q30KQ9 67 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
VRK3-201ENST00000316763 NXNL2Q5VZ03 156 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 DESI1Q6ICB0 168 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 QSOX2Q6ZRP7 698 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 AKAP14Q86UN6 197 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 GALNT12Q8IXK2 581 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 KLHL36Q8N4N3 616 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 Q8N9G6 341 aaPredicted RBP13.11□□□□□ -0.31
VRK3-201ENST00000316763 PSD4Q8NDX1 1056 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 GPR151Q8TDV0 419 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 ASB15Q8WXK1 588 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 TMEM203Q969S6 136 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 SDHCQ99643 169 aaPredicted RBP13.11□□□□□ -0.31
VRK3-201ENST00000316763 COQ7Q99807 217 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 EVA1AQ9H8M9 152 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 ENAMQ9NRM1 1142 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 TOR4AQ9NXH8 423 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 CLCA2Q9UQC9 943 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 EXOGQ9Y2C4 368 aaKnown RBP13.11□□□□□ -0.31
VRK3-201ENST00000316763 ZNF860A6NHJ4 632 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 UNC119BA6NIH7 251 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 PLD2O14939 933 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 SOX30O94993 753 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 THY1P04216 161 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 CTSBP07858 339 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 LIMS3P0CW19 117 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 LIMS4P0CW20 117 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 NID1P14543 1247 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 SPNP16150 400 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 RPS4Y1P22090 263 aaKnown RBP13.11□□□□□ -0.31
VRK3-201ENST00000316763 ZNF136P52737 540 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 RPS25P62851 125 aaKnown RBP13.11□□□□□ -0.31
VRK3-201ENST00000316763 ID2Q02363 134 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 CD300CQ08708 224 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 HNRNPA0Q13151 305 aaKnown RBP13.11□□□□□ -0.31
VRK3-201ENST00000316763 AMZ1Q400G9 498 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 CCNJQ5T5M9 372 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 STPG1Q5TH74 334 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 GDPD3Q7L5L3 318 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 GID4Q8IVV7 300 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 CDK20Q8IZL9 346 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 OR52L1Q8NGH7 329 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 SAMD8Q96LT4 415 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 PDE7BQ9NP56 450 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 PLCL2Q9UPR0 1127 aa13.11□□□□□ -0.31
VRK3-201ENST00000316763 SF3B6Q9Y3B4 125 aaKnown RBP13.11□□□□□ -0.31
VRK3-201ENST00000316763 FAM186AA6NE01 2351 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 AKAP8O43823 692 aaKnown RBP13.1□□□□□ -0.31
VRK3-201ENST00000316763 GALR3O60755 368 aaPredicted RBP13.1□□□□□ -0.31
VRK3-201ENST00000316763 FMO6PO60774 539 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 DNAJB6O75190 326 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 NTN1O95631 604 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 FGF9P31371 208 aaPredicted RBP13.1□□□□□ -0.31
VRK3-201ENST00000316763 MLLT3P42568 568 aaPredicted RBP13.1□□□□□ -0.31
VRK3-201ENST00000316763 PPM1FP49593 454 aaPredicted RBP13.1□□□□□ -0.31
VRK3-201ENST00000316763 FLYWCH1Q4VC44 716 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 EXOSC6Q5RKV6 272 aaKnown RBP13.1□□□□□ -0.31
VRK3-201ENST00000316763 RPL13AP3Q6NVV1 102 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 GUSBP11Q6P575 273 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 PRSS41Q7RTY9 318 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 PRSS42Q7Z5A4 293 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 LHFPL3Q86UP9 236 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 OR52N1Q8NH53 320 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 BRIX1Q8TDN6 353 aaKnown RBP13.1□□□□□ -0.31
VRK3-201ENST00000316763 TM9SF4Q92544 642 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 POLE3Q9NRF9 147 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 STARD5Q9NSY2 213 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 SACM1LQ9NTJ5 587 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 C14orf119Q9NWQ9 140 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 TMEM5Q9Y2B1 443 aa13.1□□□□□ -0.31
VRK3-201ENST00000316763 COL5A1P20908 1838 aaPredicted RBP13.1□□□□□ -0.31
VRK3-201ENST00000316763 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.09□□□□□ -0.31
VRK3-201ENST00000316763 TRDV1A0A1B0GX56 115 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 FGF17O60258 216 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 LDB3O75112 727 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 BMP7P18075 431 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 SDC2P34741 201 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 GCGRP47871 477 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 TPTEP56180 551 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 POU6F2P78424 691 aaPredicted RBP13.09□□□□□ -0.31
VRK3-201ENST00000316763 ACSM1Q08AH1 577 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 OR1Q1Q15612 314 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 ARMC4Q5T2S8 1044 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 MRPL2Q5T653 305 aaKnown RBP13.09□□□□□ -0.31
VRK3-201ENST00000316763 DDI2Q5TDH0 399 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 CXXC5Q7LFL8 322 aaKnown RBP13.09□□□□□ -0.31
VRK3-201ENST00000316763 SHFQ7M4L6 423 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 NAXDQ8IW45 347 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 LAX1Q8IWV1 398 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 SIMC1Q8NDZ2 872 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 ITFG2Q969R8 447 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 SLC41A2Q96JW4 573 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 JAM3Q9BX67 310 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 RERGLQ9H628 205 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 C14orf105Q9NVL8 296 aa13.09□□□□□ -0.31
VRK3-201ENST00000316763 TNFRSF10DQ9UBN6 386 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms