RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ART1P52961 327 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 SIRPAP78324 504 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 OR2F1Q13607 317 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 PON3Q15166 354 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 PLBD1Q6P4A8 553 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 ENPP7Q6UWV6 458 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 TCEAL8Q8IYN2 117 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 RASGEF1AQ8N9B8 481 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 OR6N1Q8NGY5 312 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 WBP1Q96G27 269 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 AMDHD1Q96NU7 426 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 SEC22CQ9BRL7 303 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 OR10A4Q9H209 315 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 TAS2R3Q9NYW6 316 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 COMMD9Q9P000 198 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 CITO14578 2027 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 RFPL4AA6NLU0 287 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 RFPL4AL1F8VTS6 287 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 YKT6O15498 198 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 ABLIM3O94929 683 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 KDM4BO94953 1096 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 GALTP07902 379 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 LAMP2P13473 410 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 SRP9P49458 86 aaKnown RBP4.45□□□□□ -1.7
PTPN13-201ENST00000316707 VEGFCP49767 419 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 CAPZA1P52907 286 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 ZP1P60852 638 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 CDK5R1Q15078 307 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 LRFN4Q6PJG9 635 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 ALKAL2Q6UX46 152 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 CDH26Q8IXH8 852 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 PXT1Q8NFP0 134 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 BEST4Q8NFU0 473 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 OR4D11Q8NGI4 311 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 OR4Q3Q8NH05 313 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 SNX33Q8WV41 574 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 HSD17B8Q92506 261 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 SMIM19Q96E16 107 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 ARL5BQ96KC2 179 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 LINC00615Q96LM1 132 aaPredicted RBP4.45□□□□□ -1.7
PTPN13-201ENST00000316707 RAB11FIP5Q9BXF6 653 aa4.45□□□□□ -1.7
PTPN13-201ENST00000316707 KANTRA0A1W2PQU2 76 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 IFITM5A6NNB3 132 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 DISC1C4P0D8 188 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SUSD5O60279 629 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ERAL1O75616 437 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CDC123O75794 336 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF432O94892 652 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CH25HO95992 272 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 WNT1P04628 370 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 LPLP06858 475 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 H2AFB1P0C5Y9 115 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SNRPBP14678 240 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CD79BP40259 229 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SLC16A1P53985 500 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 FOXK2Q01167 660 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 IL10RAQ13651 578 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 LASP1Q14847 261 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 PAN3Q58A45 887 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TECPR1Q7Z6L1 1165 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 NR2C2APQ86WQ0 139 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 NPAS4Q8IUM7 802 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 C12orf45Q8N5I9 185 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 EDAQ92838 391 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SLC41A3Q96GZ6 507 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 FAM46AQ96IP4 442 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 F2RL3Q96RI0 385 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TSNAXQ99598 290 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 NPAS1Q99742 590 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SLC25A21Q9BQT8 299 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CHIAQ9BZP6 476 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 RASL12Q9NYN1 266 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 KIAA1217Q5T5P2 1943 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ANTXRLA6NF34 631 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 OR5K4A6NMS3 321 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SAP18O00422 153 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 OGG1O15527 345 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ELFN1P0C7U0 828 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF3P17036 446 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SELENOPP49908 381 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SLC7A9P82251 487 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 REEP5Q00765 189 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF345Q14585 488 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CCSMST1Q4G0I0 132 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TRAPPC5Q8IUR0 188 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SIRT6Q8N6T7 355 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SAMD8Q96LT4 415 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM27Q9HBJ8 222 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SPG21Q9NZD8 308 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 MED31Q9Y3C7 131 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CHST2Q9Y4C5 530 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 MICAL3Q7RTP6 2002 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ANKRD12Q6UB98 2062 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CPSF4LA6NMK7 179 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 J3QRE1 110 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 IMPA2O14732 288 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 VEGFDO43915 354 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TEAD1P28347 426 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 OPRD1P41143 372 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ACTBP60709 375 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms