RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SOX15O60248 233 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SLC19A2O60779 497 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SC5DO75845 299 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 BPNT1O95861 308 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 HOXB5P09067 269 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 CD3GP09693 182 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 UBBP0CG47 229 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 UBCP0CG48 685 aaKnown RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 TFPIP10646 304 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 BPIP17213 487 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 HOXA5P20719 270 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 TACR2P21452 398 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 RPS27AP62979 156 aaKnown RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 UBA52P62987 128 aaKnown RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SKP1P63208 163 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 MLLT11Q13015 90 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SLC9A5Q14940 896 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 PRAMEF8Q5VWM4 474 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 PRAMEF7Q5VXH5 474 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 OVOS1Q6IE37 1185 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 FBXL22Q6P050 247 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 LYPD4Q6UWN0 246 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 CRIPAKQ8N1N5 446 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 HDDC3Q8N4P3 179 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SPICQ8N5J4 248 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 BEND2Q8NDZ0 799 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 OR4K2Q8NGD2 314 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 OR2G2Q8NGZ5 317 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 OR56B4Q8NH76 319 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 NETO1Q8TDF5 533 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 CXorf40AQ8TE69 158 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 APOBEC4Q8WW27 367 aaKnown RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SLC25A28Q96A46 364 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 ECHDC3Q96DC8 303 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SYT17Q9BSW7 474 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 SEC11CQ9BY50 192 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 ACPTQ9BZG2 426 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 POLR2J2Q9GZM3 115 aaKnown RBP6.2□□□□□ -1.42
ZNF540-201ENST00000316433 R3HDMLQ9H3Y0 253 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 EPHX3Q9H6B9 360 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 PTGES2Q9H7Z7 377 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 LHX3Q9UBR4 397 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 NUP205Q92621 2012 aa6.2□□□□□ -1.42
ZNF540-201ENST00000316433 OR2M5A3KFT3 312 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SUPT3HB4E1H0 165 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 EFSO43281 561 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 DIRAS1O95057 198 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PMP2P02689 132 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ANXA2P07355 339 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CCND3P30281 292 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SLC6A4P31645 630 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 GKP32189 559 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CDX1P47902 265 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SRP9P49458 86 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PRKXP51817 358 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SOX8P57073 446 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 VMACQ2NL98 169 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ZNF658BQ4V348 819 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ARSIQ5FYB1 569 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 PIM3Q86V86 326 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SLITRK4Q8IW52 837 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CPXM2Q8N436 756 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 KLHDC9Q8NEP7 349 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 OR52N2Q8NGI0 321 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 GNPDA2Q8TDQ7 276 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SENP5Q96HI0 755 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 MRGPRX4Q96LA9 322 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 NSUN5Q96P11 429 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 EGFL8Q99944 293 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 GINS4Q9BRT9 223 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 IFT27Q9BW83 186 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 BHLHE41Q9C0J9 482 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 RERGLQ9H628 205 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 REEP1Q9H902 201 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CERS4Q9HA82 394 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 LRTM1Q9HBL6 345 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 NT5MQ9NPB1 228 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 NPDC1Q9NQX5 325 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 UBP1Q9NZI7 540 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 KCTD3Q9Y597 815 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 A0A1W2PQH9 124 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 DUXAA6NLW8 204 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 IFITM10A6NMD0 228 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 OR2AT4A6NND4 320 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 FFAR2O15552 330 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 EEF1E1O43324 174 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 YIF1AO95070 293 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 FABP3P05413 133 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 THBS1P07996 1170 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 GUSBP08236 651 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 GSTP1P09211 210 aaKnown RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 ANKRD34CP0C6C1 535 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 EPORP19235 508 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 MAPK3P27361 379 aaPredicted RBP6.19□□□□□ -1.42
ZNF540-201ENST00000316433 CERS1P27544 350 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 SHC1P29353 583 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 MPGP29372 298 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 OR1E1P30953 314 aa6.19□□□□□ -1.42
ZNF540-201ENST00000316433 IRS1P35568 1242 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms