RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 NR0B1P51843 470 aaKnown RBP12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 ERVK-25P63136 954 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 FAM26EQ8N5C1 309 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 GPER1Q99527 375 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 DOK1Q99704 481 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 CHIAQ9BZP6 476 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 UBQLN3Q9H347 655 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 LRRN3Q9H3W5 708 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 PRDM7Q9NQW5 492 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 CBLCQ9ULV8 474 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 NPIPA1Q9UND3 350 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 KCNE3Q9Y6H6 103 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 FGF17O60258 216 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 CDC40O60508 579 aaKnown RBP eCLIP12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 PLGP00747 810 aaPredicted RBP12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 PIPP12273 146 aaPredicted RBP12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 MAPK3P27361 379 aaPredicted RBP12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 RPS19P39019 145 aaKnown RBP12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 EIF1AXP47813 144 aaKnown RBP12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 TEKQ02763 1124 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 GFOD2Q3B7J2 385 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 LIN54Q6MZP7 749 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 TNFAIP8L1Q8WVP5 186 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 ADOQ96SZ5 270 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 MAP3K3Q99759 626 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 KLHL21Q9UJP4 597 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 SLC35A3Q9Y2D2 325 aa12.48□□□□□ -0.41
PCDHB9-201ENST00000316105 ARRDC5A6NEK1 342 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 GPX5O75715 221 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 NCR1O76036 304 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 SOD1P00441 154 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 GABRA5P31644 462 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 MAB21L1Q13394 359 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 LINC00299Q6ZSB3 139 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 RASGRP3Q8IV61 690 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 ELMOD2Q8IZ81 293 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 RNF113BQ8IZP6 322 aaKnown RBP12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 NANOGP1Q8N7R0 232 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 NARS2Q96I59 477 aaKnown RBP12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 FCRL1Q96LA6 429 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 PDCD10Q9BUL8 212 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 CHST8Q9H2A9 424 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 ANKRD19PQ9H560 264 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 HHATLQ9HCP6 504 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 ATP13A2Q9NQ11 1180 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 MED17Q9NVC6 651 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 A0A1B0GVC2 190 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 A6NIN4 97 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 GABRPO00591 440 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 SRPX2O60687 465 aaPredicted RBP12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 DPM1O60762 260 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 HEXBP07686 556 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 PEPDP12955 493 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 ETV5P41161 510 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 OR1D4P47884 311 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 ETV1P50549 477 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 GNG2P59768 71 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 NXNL2Q5VZ03 156 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 LYSMD2Q8IV50 215 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 GALNT6Q8NCL4 622 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 ASB15Q8WXK1 588 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 TNFRSF13CQ96RJ3 184 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 MKL2Q9ULH7 1088 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 ERVK-11Q9UQG0 969 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 PCM1Q15154 2024 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 A0A1B0GWA3 101 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 EIF1AYO14602 144 aaKnown RBP12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 CFL1P23528 166 aaKnown RBP12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 NRARPQ7Z6K4 114 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 PHC2Q8IXK0 858 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 LRRC56Q8IYG6 542 aaPredicted RBP12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 S100A16Q96FQ6 103 aaKnown RBP12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 HOXD1Q9GZZ0 328 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 SEC61A2Q9H9S3 476 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 FBXO8Q9NRD0 319 aa12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
PCDHB9-201ENST00000316105 IL7P13232 177 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 PGCP20142 388 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 TEAD1P28347 426 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 SLC16A12Q6ZSM3 486 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 SLITRK4Q8IW52 837 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 SLC6A18Q96N87 628 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 METTL7AQ9H8H3 244 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 EPHA6Q9UF33 1036 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 C19orf53Q9UNZ5 99 aaPredicted RBP12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 ASB4Q9Y574 426 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 CKAP5Q14008 2032 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 CCDC88CQ9P219 2028 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 PCBP3P57721 371 aaKnown RBP12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 PCBP4P57723 403 aaKnown RBP12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 CRMP1Q14194 572 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 ALG10Q5BKT4 473 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 DNM1P34Q6PK57 102 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 TMEM184AQ6ZMB5 413 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 SHISA6Q6ZSJ9 500 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 KIAA0907Q7Z7F0 614 aaPredicted RBP12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 ATCAYQ86WG3 371 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 SLC35F2Q8IXU6 374 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 KIAA1958Q8N8K9 716 aa12.46□□□□□ -0.41
PCDHB9-201ENST00000316105 TRMT10AQ8TBZ6 339 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms