RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 LHPPQ9H008 270 aa15.35■□□□□ 0.05
CLCF1-201ENST00000312438 TMEM9BQ9NQ34 198 aa15.35■□□□□ 0.05
CLCF1-201ENST00000312438 C20orf141Q9NUB4 165 aa15.35■□□□□ 0.05
CLCF1-201ENST00000312438 CNOT2Q9NZN8 540 aaKnown RBP15.35■□□□□ 0.05
CLCF1-201ENST00000312438 CDH10Q9Y6N8 788 aa15.35■□□□□ 0.05
CLCF1-201ENST00000312438 EFCAB10A6NFE3 127 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 ZNF99A8MXY4 864 aaPredicted RBP15.34■□□□□ 0.05
CLCF1-201ENST00000312438 ALG1L2C9J202 215 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 ENTPD6O75354 484 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 CDK1P06493 297 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 MAKP20794 623 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 GSTT1P30711 240 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 RAB15P59190 212 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 SKP2Q13309 424 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 KIRREL2Q6UWL6 708 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 ZNF420Q8TAQ5 688 aaPredicted RBP15.34■□□□□ 0.05
CLCF1-201ENST00000312438 FAR1Q8WVX9 515 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 RORBQ92753 470 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 NMD3Q96D46 503 aaKnown RBP15.34■□□□□ 0.05
CLCF1-201ENST00000312438 MESP1Q9BRJ9 268 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 EDEM2Q9BV94 578 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 LIN28AQ9H9Z2 209 aaKnown RBP15.34■□□□□ 0.05
CLCF1-201ENST00000312438 ATP13A2Q9NQ11 1180 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 MEPEQ9NQ76 525 aaPredicted RBP15.34■□□□□ 0.05
CLCF1-201ENST00000312438 TBC1D23Q9NUY8 699 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 CARD8Q9Y2G2 431 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 LOXL2Q9Y4K0 774 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 NPFFR2Q9Y5X5 522 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 NUP210LQ5VU65 1888 aa15.34■□□□□ 0.05
CLCF1-201ENST00000312438 A0A087WUJ7 227 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 OR6C70A6NIJ9 312 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 KPNA4O00629 521 aaPredicted RBP15.33■□□□□ 0.05
CLCF1-201ENST00000312438 PRKYO43930 277 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 PTNP21246 168 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 SLC26A5P58743 744 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 CCDC157Q569K6 752 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 DESI1Q6ICB0 168 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 WBP2NLQ6ICG8 309 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 RPL13AP3Q6NVV1 102 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 CBLN3Q6UW01 205 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 STX19Q8N4C7 294 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 SUMF1Q8NBK3 374 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 BRIX1Q8TDN6 353 aaKnown RBP15.33■□□□□ 0.05
CLCF1-201ENST00000312438 PMEPA1Q969W9 287 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 TSC22D3Q99576 134 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 ZPBPQ9BS86 351 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 ACOT13Q9NPJ3 140 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 GPR83Q9NYM4 423 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 RPL36Q9Y3U8 105 aaKnown RBP15.33■□□□□ 0.05
CLCF1-201ENST00000312438 COMMD3-BMI1R4GMX3 469 aa15.33■□□□□ 0.05
CLCF1-201ENST00000312438 LOC102723996A0A087X1L8 192 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 NDUFB5O43674 189 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 EIF4E2O60573 245 aaKnown RBP15.33■□□□□ 0.04
CLCF1-201ENST00000312438 RFPL3O75679 317 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 RCBTB2O95199 551 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 BMP7P18075 431 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 DCKP27707 260 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 C21orf33P30042 268 aaPredicted RBP15.33■□□□□ 0.04
CLCF1-201ENST00000312438 MAP2K4P45985 399 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 SLC6A8P48029 635 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 INSM1Q01101 510 aaPredicted RBP15.33■□□□□ 0.04
CLCF1-201ENST00000312438 ST3GAL4Q11206 333 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 CLEC12AQ5QGZ9 265 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 GPR107Q5VW38 600 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 B3GNT6Q6ZMB0 384 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 ALDH16A1Q8IZ83 802 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 OR2T33Q8NG76 320 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 C8orf44Q96CB5 159 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 TBL1XR1Q9BZK7 514 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 ZBTB20Q9HC78 741 aaPredicted RBP15.33■□□□□ 0.04
CLCF1-201ENST00000312438 B3GALT1Q9Y5Z6 326 aa15.33■□□□□ 0.04
CLCF1-201ENST00000312438 TRBV11-1A0A0K0K1C0 115 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 EFCAB9A8MZ26 197 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 ZFAND5O76080 213 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 INMTO95050 263 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 HMGN1P05114 100 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 STSP08842 583 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 CD63P08962 238 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 PNMTP11086 282 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 PIPP12273 146 aaPredicted RBP15.32■□□□□ 0.04
CLCF1-201ENST00000312438 COL5A1P20908 1838 aaPredicted RBP15.32■□□□□ 0.04
CLCF1-201ENST00000312438 SLC15A1P46059 708 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 EFR3AQ14156 821 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 NCF4Q15080 339 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 FAM198BQ6UWH4 519 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 RAB11FIP2Q7L804 512 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 MARCH3Q86UD3 253 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 AMER2Q8N7J2 671 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 GALNT6Q8NCL4 622 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 TMEM163Q8TC26 289 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 FGF11Q92914 225 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 C3orf49Q96BT1 292 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 ISOC1Q96CN7 298 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 LRR1Q96L50 414 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 SAMD8Q96LT4 415 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 PHOX2BQ99453 314 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 OR52D1Q9H346 318 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 ICAM5Q9UMF0 924 aa15.32■□□□□ 0.04
CLCF1-201ENST00000312438 HTR3EA5X5Y0 456 aa15.31■□□□□ 0.04
CLCF1-201ENST00000312438 SNTNA6NMZ2 147 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms