RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 MICU2Q8IYU8 434 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 PGAM4Q8N0Y7 254 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 PMM1Q92871 262 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 RNF145Q96MT1 663 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 SFXN2Q96NB2 322 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 TMEM185BQ9H7F4 350 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 TAS2R1Q9NYW7 299 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 EGFL7Q9UHF1 273 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 ANGPT4Q9Y264 503 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 KIAA1549Q9HCM3 1950 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 J3QKU1 62 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 TPST2O60704 377 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 TPOP07202 933 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 PEPDP12955 493 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 ABOP16442 354 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 PRKCAP17252 672 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 CD247P20963 164 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 CALB2P22676 271 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 SHC1P29353 583 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 LHX2P50458 406 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 CLDN20P56880 219 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 SESN3P58005 492 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 SRYQ05066 204 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 SRSF1Q07955 248 aaKnown RBP eCLIP8.22□□□□□ -1.093e-8■■□□□ 13.6
PDE4D-201ENST00000309641 CEACAM7Q14002 265 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 LARS2Q15031 903 aaKnown RBP8.22□□□□□ -1.09
PDE4D-201ENST00000309641 GXYLT1Q4G148 440 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 RNF220Q5VTB9 566 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 C6orf89Q6UWU4 347 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 ATCAYQ86WG3 371 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 KRT73Q86Y46 540 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 DOLPP1Q86YN1 238 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 RBM45Q8IUH3 476 aaKnown RBP8.22□□□□□ -1.09
PDE4D-201ENST00000309641 ARMC8Q8IUR7 673 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 LACC1Q8IV20 430 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 OR4D11Q8NGI4 311 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 SMPDL3BQ92485 455 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 ABTB1Q969K4 478 aaPredicted RBP8.22□□□□□ -1.09
PDE4D-201ENST00000309641 SPATA9Q9BWV2 254 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 ALKBH4Q9NXW9 302 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 CD300AQ9UGN4 299 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 ACAD8Q9UKU7 415 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 ZNF232Q9UNY5 417 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 IFT52Q9Y366 437 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 MRPS18CQ9Y3D5 142 aaKnown RBP8.22□□□□□ -1.09
PDE4D-201ENST00000309641 LRRK2Q5S007 2527 aa8.22□□□□□ -1.09
PDE4D-201ENST00000309641 H3BML4 177 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 M0R3H8 397 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 SEMA7AO75326 666 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 NTN1O95631 604 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 PRKAR1BP31321 381 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 KDELR2P33947 212 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 IDH2P48735 452 aaKnown RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 ZNF41P51814 821 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 ZNF136P52737 540 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 SUCLG1P53597 346 aaKnown RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 EEFSECP57772 596 aaKnown RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 EPS8Q12929 822 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 CBFBQ13951 182 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 VEZF1Q14119 521 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 ELOAQ14241 798 aaKnown RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 GANABQ14697 944 aaKnown RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 LRRC23Q53EV4 343 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 POMZP3Q6PJE2 187 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 Q6ZPB1 254 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 CCDC80Q76M96 950 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 TSPYL5Q86VY4 417 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 CMIPQ8IY22 773 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 UBQLNLQ8IYU4 475 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 TOR1AIP2Q8NFQ8 470 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 FAM57AQ8TBR7 257 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 OIT3Q8WWZ8 545 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 FIG4Q92562 907 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 SLC7A6OSQ96CW6 309 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 DNAJA3Q96EY1 480 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 WDYHV1Q96HA8 205 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 CLPTM1LQ96KA5 538 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 ZNF607Q96SK3 696 aa8.21□□□□□ -1.1
PDE4D-201ENST00000309641 KCTD14Q9BQ13 255 aaPredicted RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 EXOSC3Q9NQT5 275 aaKnown RBP8.21□□□□□ -1.1
PDE4D-201ENST00000309641 TRGV8A0A0C4DH27 118 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 CFAP73A6NFT4 308 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 CXCR6O00574 342 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 STSP08842 583 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 RNF224P0DH78 156 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 HTR2AP28223 471 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 KCNJ5P48544 419 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 SUMO3P55854 103 aaPredicted RBP8.2□□□□□ -1.1
PDE4D-201ENST00000309641 CLDN18P56856 261 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 NHSL2Q5HYW2 709 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 RTL6Q6ICC9 239 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 ZNF585AQ6P3V2 769 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 ERICH5Q6P6B1 374 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 DHRS4L2Q6PKH6 230 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 PATL1Q86TB9 770 aaKnown RBP8.2□□□□□ -1.1
PDE4D-201ENST00000309641 FJX1Q86VR8 437 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 GRAMD2AQ8IUY3 354 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 GTPBP8Q8N3Z3 284 aaPredicted RBP8.2□□□□□ -1.1
PDE4D-201ENST00000309641 ATP6V1C2Q8NEY4 427 aa8.2□□□□□ -1.1
PDE4D-201ENST00000309641 PCDHAC1Q9H158 963 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms