RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 OR12D1P0DN82 309 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 UQCRC2P22695 453 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 PHC1P78364 1004 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 BST1Q10588 318 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 ARHGAP11BQ3KRB8 267 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 TNFAIP8L3Q5GJ75 292 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 ANXA8L1Q5VT79 327 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 STAC2Q6ZMT1 411 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 BEND4Q6ZU67 534 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 FCRLAQ7L513 359 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 RAB8BQ92930 207 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 TESCQ96BS2 214 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 ZNF524Q96C55 264 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 ZNF350Q9GZX5 532 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 MEAF6Q9HAF1 191 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 HAO1Q9UJM8 370 aa17.42■□□□□ 0.38
LIME1-201ENST00000309546 PRSS51A0A1B0GVH4 220 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 A0A1W2PNR3 127 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 SCN2BO60939 215 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 UGT2B17O75795 530 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 UBTFL6P0CB48 400 aaPredicted RBP17.41■□□□□ 0.38
LIME1-201ENST00000309546 PPP3CBP16298 524 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 CHI3L1P36222 383 aaPredicted RBP17.41■□□□□ 0.38
LIME1-201ENST00000309546 CLNS1AP54105 237 aaKnown RBP17.41■□□□□ 0.38
LIME1-201ENST00000309546 NKX6-1P78426 367 aaPredicted RBP17.41■□□□□ 0.38
LIME1-201ENST00000309546 SKP2Q13309 424 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 RNPS1Q15287 305 aaKnown RBP17.41■□□□□ 0.38
LIME1-201ENST00000309546 ZNF141Q15928 474 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 FAM174BQ3ZCQ3 159 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 ATAD3BQ5T9A4 648 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 ALKBH2Q6NS38 261 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 CROCCP2Q86T23 111 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 WFDC8Q8IUA0 241 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 TUSC5Q8IXB3 177 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 MGARPQ8TDB4 240 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 XAGE5Q8WWM1 108 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 CCL19Q99731 98 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 SLC35A5Q9BS91 424 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 THUMPD3Q9BV44 507 aaKnown RBP17.41■□□□□ 0.38
LIME1-201ENST00000309546 ACTR6Q9GZN1 396 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 QRSL1Q9H0R6 528 aaKnown RBP17.41■□□□□ 0.38
LIME1-201ENST00000309546 KLHL13Q9P2N7 655 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 KCNE5Q9UJ90 142 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 MTORP42345 2549 aa17.41■□□□□ 0.38
LIME1-201ENST00000309546 DSCAMO60469 2012 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 VPS13CQ709C8 3753 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 IGHV3-15A0A0B4J1V0 119 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 C9JVG2 144 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 E9PBE3 544 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 ANKRD28O15084 1053 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 SMPD2O60906 423 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 AGR2O95994 175 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 THBDP07204 575 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 S100A3P33764 101 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 KHKP50053 298 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 ACKR1Q16570 336 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 DPY19L1Q2PZI1 675 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 BEX5Q5H9J7 111 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 C3orf33Q6P1S2 294 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 NUFIP2Q7Z417 695 aaKnown RBP17.4■□□□□ 0.38
LIME1-201ENST00000309546 HMGN2P46Q86SG4 172 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 CXorf67Q86X51 503 aaPredicted RBP17.4■□□□□ 0.38
LIME1-201ENST00000309546 P3H2Q8IVL5 708 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 MIPOL1Q8TD10 442 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 ARL8AQ96BM9 186 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 ROPN1LQ96C74 230 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 MARK4Q96L34 752 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 OR5B2Q96R09 309 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 LAT2Q9GZY6 243 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 GSX1Q9H4S2 264 aaPredicted RBP17.4■□□□□ 0.38
LIME1-201ENST00000309546 DLL4Q9NR61 685 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 MARCOQ9UEW3 520 aaPredicted RBP17.4■□□□□ 0.38
LIME1-201ENST00000309546 WDR45Q9Y484 360 aa17.4■□□□□ 0.38
LIME1-201ENST00000309546 RAI1Q7Z5J4 1906 aaPredicted RBP17.4■□□□□ 0.38
LIME1-201ENST00000309546 ZFHX3Q15911 3703 aa17.39■□□□□ 0.38
LIME1-201ENST00000309546 ACANP16112 2415 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.39■□□□□ 0.37
LIME1-201ENST00000309546 ESPNB1AK53 854 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 KIAA0513O60268 411 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 PRKD3O94806 890 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 NTN1O95631 604 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 ALDOCP09972 364 aaKnown RBP17.39■□□□□ 0.37
LIME1-201ENST00000309546 NID1P14543 1247 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 FPR1P21462 350 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 ENPP1P22413 925 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 LOXP28300 417 aaPredicted RBP17.39■□□□□ 0.37
LIME1-201ENST00000309546 HOXC12P31275 282 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 HPCAP84074 193 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 CASP8Q14790 479 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 TIGD2Q4W5G0 525 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 SLC25A53Q5H9E4 307 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 SAXO2Q658L1 398 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 TYW3Q6IPR3 259 aaKnown RBP17.39■□□□□ 0.37
LIME1-201ENST00000309546 HEPHL1Q6MZM0 1159 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 TFAP2EQ6VUC0 442 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 EIF3MQ7L2H7 374 aaKnown RBP17.39■□□□□ 0.37
LIME1-201ENST00000309546 LRRC34Q8IZ02 419 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 PIGTQ969N2 578 aa17.39■□□□□ 0.37
LIME1-201ENST00000309546 FREM1Q5H8C1 2179 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 GOLGA8QA0A0J9YX86 632 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms