RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 LAS2Q8IYD9 372 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 TMEFF1Q8IYR6 380 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 BEST3Q8N1M1 668 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 LMF1Q96S06 567 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 UBQLN3Q9H347 655 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 RHPN2P1A8MT19 583 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 HIDE1A8MVS5 230 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 PIP5K1CO60331 668 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 SPDEFO95238 335 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 CD160O95971 181 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 TCRBP04435 133 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 CPEP16870 476 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 ZNF20P17024 532 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 CCKBRP32239 447 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 SRP9P49458 86 aaKnown RBP12.4□□□□□ -0.42
DDX54-201ENST00000306014 BLKP51451 505 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 CCR6P51684 374 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 ERVK-25P63136 954 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 CSNK1G2P78368 415 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 EIF4EBP2Q13542 120 aaPredicted RBP12.4□□□□□ -0.42
DDX54-201ENST00000306014 RUNX3Q13761 415 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 CRMP1Q14194 572 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 MBOAT2Q6ZWT7 520 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 TPRA1Q86W33 373 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 TMIEQ8NEW7 156 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 ABHD4Q8TB40 342 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
DDX54-201ENST00000306014 PEX11GQ96HA9 241 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 OR2A14Q96R47 310 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 ZDHHC5Q9C0B5 715 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 CST11Q9H112 138 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 CHST8Q9H2A9 424 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 MED17Q9NVC6 651 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.42
DDX54-201ENST00000306014 RGPD4Q7Z3J3 1758 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 KCNE1BA0A087WTH5 132 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 TRBV5-3A0A0A0MS03 114 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 GATBO75879 557 aaKnown RBP12.4□□□□□ -0.42
DDX54-201ENST00000306014 INHBBP09529 407 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 C5AR1P21730 350 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 SOX18P35713 384 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 FRKP42685 505 aaPredicted RBP12.4□□□□□ -0.42
DDX54-201ENST00000306014 PDX1P52945 283 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 LRFN4Q6PJG9 635 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 LNX2Q8N448 690 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 GALNT11Q8NCW6 608 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 PTCHD1Q96NR3 888 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 SERINC2Q96SA4 455 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 EPHX3Q9H6B9 360 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 METTL8Q9H825 291 aaKnown RBP12.4□□□□□ -0.42
DDX54-201ENST00000306014 SLC39A1Q9NY26 324 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 KCMF1Q9P0J7 381 aa12.4□□□□□ -0.42
DDX54-201ENST00000306014 ACOD1A6NK06 481 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 POM121CA8CG34 1229 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 KIAA0355O15063 1070 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 LGI1O95970 557 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ELK1P19419 428 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 MTNR1BP49286 362 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 REEP5Q00765 189 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ZNF322Q6U7Q0 402 aaPredicted RBP12.39□□□□□ -0.43
DDX54-201ENST00000306014 FCRLAQ7L513 359 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 OR2L3Q8NG85 312 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 SYNPRQ8TBG9 265 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 CNOT9Q92600 299 aaKnown RBP12.39□□□□□ -0.43
DDX54-201ENST00000306014 HAVCR1Q96D42 359 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 CMKLR1Q99788 373 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 NTNG1Q9Y2I2 539 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 TMEM14AQ9Y6G1 99 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ASCC3Q8N3C0 2202 aaKnown RBP12.39□□□□□ -0.43
DDX54-201ENST00000306014 GOSR2O14653 212 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 AHSA1O95433 338 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 PLGP00747 810 aaPredicted RBP12.39□□□□□ -0.43
DDX54-201ENST00000306014 GP1BBP13224 206 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 S1PR1P21453 382 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 TEAD1P28347 426 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 GRK5P34947 590 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 IRF4Q15306 451 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ELP2Q6IA86 826 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 FAM111BQ6SJ93 734 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 APOOLQ6UXV4 268 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 BTN2A1Q7KYR7 527 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 SIAH3Q8IW03 269 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ZFYVE21Q9BQ24 234 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 STARD5Q9NSY2 213 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ABRACLQ9P1F3 81 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ZC3H12DA2A288 527 aaKnown RBP12.39□□□□□ -0.43
DDX54-201ENST00000306014 CDHR4A6H8M9 788 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 CDC40O60508 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDX54-201ENST00000306014 SLC2A10O95528 541 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 FPR3P25089 353 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ZFP36L2P47974 494 aaKnown RBP12.39□□□□□ -0.43
DDX54-201ENST00000306014 GRK1Q15835 563 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 CREB3L2Q70SY1 520 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 ANKRD33Q7Z3H0 272 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 PLA2G15Q8NCC3 412 aa12.39□□□□□ -0.43
DDX54-201ENST00000306014 OR56B4Q8NH76 319 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms