RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 IL11P20809 199 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 SFTPDP35247 375 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 CDKN2CP42773 168 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 SLC6A8P48029 635 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 SKP2Q13309 424 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 QPRTQ15274 297 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 TOMM34Q15785 309 aaPredicted RBP23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 GPAT3Q53EU6 434 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 SLC25A53Q5H9E4 307 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 FBXW10Q5XX13 1052 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 GTF2IRD2BQ6EKJ0 949 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 GTF2IRD2Q86UP8 949 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 ZNF619Q8N2I2 560 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 OSTF1Q92882 214 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 OPN3Q9H1Y3 402 aaPredicted RBP23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 PROCRQ9UNN8 238 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 LIPT1Q9Y234 373 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 SLC35A3Q9Y2D2 325 aa23.7■■□□□ 1.38
CDKN2A-201ENST00000304494 SH3D21A4FU49 640 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 HMGN4O00479 90 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 CYP7B1O75881 506 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 TGDSO95455 350 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 KRT75O95678 551 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 CGAP01215 116 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 CTBP2P56545 445 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 FUT5Q11128 374 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 SELENBP1Q13228 472 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 TTMPQ5BVD1 217 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 EPGNQ6UW88 154 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 FRRS1Q6ZNA5 592 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 MSANTD1Q6ZTZ1 278 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 OLIG3Q7RTU3 272 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 MIER2Q8N344 545 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 CPNE4Q96A23 557 aaPredicted RBP23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 RMND5AQ9H871 391 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 EDARQ9UNE0 448 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 POLQO75417 2590 aa23.69■■□□□ 1.38
CDKN2A-201ENST00000304494 CENPVL1A0A0U1RR11 272 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 ETV2O00321 342 aaPredicted RBP23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 DNAJA2O60884 412 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 SS18L1O75177 396 aaPredicted RBP23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 NTN1O95631 604 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 GSNP06396 782 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 PABPC4LP0CB38 370 aaKnown RBP23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 UBTFL6P0CB48 400 aaPredicted RBP23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 PGCP20142 388 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 CD79BP40259 229 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 MAGEA8P43361 318 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 OR6K3Q8NGY3 331 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 DYDC1Q8WWB3 177 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 TMEM234Q8WY98 164 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 ST8SIA1Q92185 356 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 REXO5Q96IC2 774 aaKnown RBP23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 TRNT1Q96Q11 434 aaKnown RBP23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 THUMPD3Q9BV44 507 aaKnown RBP23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 VIPAS39Q9H9C1 493 aa23.68■■□□□ 1.38
CDKN2A-201ENST00000304494 HMGB1P1B2RPK0 211 aaPredicted RBP23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 EFNA2O43921 213 aa23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 H6PDO95479 791 aa23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 ANP32DO95626 131 aa23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 POU2F1P14859 743 aa23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 DNAJA1P31689 397 aaKnown RBP23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 KCNJ5P48544 419 aa23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 FAM27E3Q08E93 113 aa23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 MAPK14Q16539 360 aa23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 ZNF474Q6S9Z5 364 aaPredicted RBP23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 ITCHQ96J02 903 aa23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.67■■□□□ 1.38
CDKN2A-201ENST00000304494 ANKRD17O75179 2603 aaKnown RBP23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 CASKO14936 926 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 POLR3GO15318 223 aaPredicted RBP23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 C1QCP02747 245 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 SHC1P29353 583 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 SLC7A1P30825 629 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 PGM1P36871 562 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 POLR2JP52435 117 aaKnown RBP23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 STX1BP61266 288 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 CHRNEQ04844 493 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 ZNF239Q16600 458 aaKnown RBP23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 TMEM176BQ3YBM2 270 aaPredicted RBP23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 C3orf33Q6P1S2 294 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 CDC20BQ86Y33 519 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 ZNF610Q8N9Z0 462 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 FAM71CQ8NEG0 241 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 ATP6V1C2Q8NEY4 427 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 ZFP90Q8TF47 636 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 NINJ1Q92982 152 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 TCF7L2Q9NQB0 619 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 PLSCR4Q9NRQ2 329 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 SERINC1Q9NRX5 453 aa23.66■■□□□ 1.38
CDKN2A-201ENST00000304494 PRAMEF27A3QJZ7 478 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 ZCCHC18P0CG32 403 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 KCNJ10P78508 379 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 RNPS1Q15287 305 aaKnown RBP23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 SYPL1Q16563 259 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 TIGD2Q4W5G0 525 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 LRRC74BQ6ZQY2 392 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 PNPT1Q8TCS8 783 aaKnown RBP23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 NRGNQ92686 78 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 PMM1Q92871 262 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms