RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 FBXW2Q9UKT8 454 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 A0A0U1RQJ8 604 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 ACOD1A6NK06 481 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 F5H0A9 414 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-201ENST00000303395 ICMTO60725 284 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 OR5H8P0DN80 308 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 CLCNKAP51800 687 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 TMEM244Q5VVB8 128 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 KCTD11Q693B1 232 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF529Q6P280 563 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 ISCA2Q86U28 154 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 TMEM173Q86WV6 379 aaPredicted RBP4.95□□□□□ -1.62
SCN1A-201ENST00000303395 ESX1Q8N693 406 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 LINC00116Q8NCU8 138 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 GPR26Q8NDV2 337 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 UPRTQ96BW1 309 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 CHRDL1Q9BU40 450 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 CPEB1Q9BZB8 566 aaKnown RBP4.95□□□□□ -1.62
SCN1A-201ENST00000303395 SRA1Q9HD15 236 aaKnown RBP4.95□□□□□ -1.62
SCN1A-201ENST00000303395 SLC2A9Q9NRM0 540 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 ZCCHC3Q9NUD5 404 aaKnown RBP4.95□□□□□ -1.62
SCN1A-201ENST00000303395 PIGVQ9NUD9 493 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 DCAF16Q9NXF7 216 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 KLK14Q9P0G3 267 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 GPR34Q9UPC5 381 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 PCDHB14Q9Y5E9 798 aa4.95□□□□□ -1.62
SCN1A-201ENST00000303395 ZFC3H1O60293 1989 aaKnown RBP4.95□□□□□ -1.62
SCN1A-201ENST00000303395 YLPM1P49750 1951 aaKnown RBP4.95□□□□□ -1.62
SCN1A-201ENST00000303395 J3QRK9 145 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SOCS2O14508 198 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 AREGP15514 252 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 GLB1P16278 677 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TEAD1P28347 426 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 AHRP35869 848 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 UBE2NP61088 152 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 MAP4K2Q12851 820 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NFATC2Q13469 925 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DESI1Q6ICB0 168 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SLC35D2Q76EJ3 337 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DCXRQ7Z4W1 244 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 MISPQ8IVT2 679 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SERPINA12Q8IW75 414 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF100Q8IYN0 542 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 MTURNQ8N3F0 131 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 M1APQ8TC57 530 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 GGHQ92820 318 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FBXL20Q96IG2 436 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TGM7Q96PF1 710 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 MFFQ9GZY8 342 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SLC6A17Q9H1V8 727 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 OR52A5Q9H2C5 316 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NOX3Q9HBY0 568 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FGF20Q9NP95 211 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 IGSF5Q9NSI5 407 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FXYD6-FXYD2A0A087WZ82 144 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TERTO14746 1132 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TSPAN3O60637 253 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 AKR1C2P52895 323 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 P2RX3P56373 397 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PNRC1Q12796 327 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF718Q3SXZ3 478 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 POM121L1PQ3SYA9 428 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 AGBL4Q5VU57 503 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 RBMS3Q6XE24 437 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TUSC5Q8IXB3 177 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 OR2AP1Q8NGE2 309 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 MAL2Q969L2 176 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 LURAP1Q96LR2 239 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SLC46A1Q96NT5 459 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CPPED1Q9BRF8 314 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TMEM43Q9BTV4 400 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 TMEM39BQ9GZU3 492 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FXYD6Q9H0Q3 95 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FAM198AQ9UFP1 575 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DOCK6Q96HP0 2047 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 AHDC1Q5TGY3 1603 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 GJE1A6NN92 205 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NSA2O95478 260 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 KNG1P01042 644 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 APEHP13798 732 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 BMI1P35226 326 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DHPSP49366 369 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CSNK2A1P68400 391 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 RAB11BQ15907 218 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FRMPD2BQ6IN97 320 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CSNK2A3Q8NEV1 391 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 CD200R1Q8TD46 325 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZNRF4Q8WWF5 429 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 MS4A4EQ96PG1 132 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 SLC30A3Q99726 388 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 FAM173AQ9BQD7 235 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 THAP7Q9BT49 309 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PCDHAC1Q9H158 963 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 KCNJ16Q9NPI9 418 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 PIH1D1Q9NWS0 290 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 DNAJB11Q9UBS4 358 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 EIF2B4Q9UI10 523 aaKnown RBP4.94□□□□□ -1.62
SCN1A-201ENST00000303395 NHSQ6T4R5 1651 aa4.94□□□□□ -1.62
SCN1A-201ENST00000303395 ZNF254O75437 659 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms