RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 PLAG1Q6DJT9 500 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 SLC16A12Q6ZSM3 486 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF440Q8IYI8 595 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 GALNT15Q8N3T1 639 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 TMEM163Q8TC26 289 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 BRIX1Q8TDN6 353 aaKnown RBP20.46■□□□□ 0.87
SMAD1-201ENST00000302085 LRR1Q96L50 414 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF582Q96NG8 517 aaPredicted RBP20.46■□□□□ 0.87
SMAD1-201ENST00000302085 RPS6KB2Q9UBS0 482 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 IL20RAQ9UHF4 553 aa20.46■□□□□ 0.87
SMAD1-201ENST00000302085 MYO15AQ9UKN7 3530 aa20.45■□□□□ 0.87
SMAD1-201ENST00000302085 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.45■□□□□ 0.86
SMAD1-201ENST00000302085 TMX2-CTNND1H3BSU7 103 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 AHCYL1O43865 530 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 ICOSLGO75144 302 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 GP1BAP07359 652 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 LCN1P31025 176 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 RBM34P42696 430 aaKnown RBP20.45■□□□□ 0.86
SMAD1-201ENST00000302085 ANKRD13BQ86YJ7 626 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 CDK20Q8IZL9 346 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 PHOSPHO1Q8TCT1 267 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 SPSB2Q99619 263 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 CDCA4Q9BXL8 241 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 RTN4RQ9BZR6 473 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 SEMA4CQ9C0C4 833 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 ENKD1Q9H0I2 346 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 SLC26A1Q9H2B4 701 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 RXFP3Q9NSD7 469 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 TMEM5Q9Y2B1 443 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 RPL36Q9Y3U8 105 aaKnown RBP20.45■□□□□ 0.86
SMAD1-201ENST00000302085 R4GN57 208 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 LNP1A1A4G5 178 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 MLLT10P55197 1068 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 MC2RQ01718 297 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 SKP2Q13309 424 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 PGGHGQ32M88 737 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 MEDAGQ5VYS4 303 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 SLCO6A1Q86UG4 719 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 SLC34A3Q8N130 599 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 RAB2BQ8WUD1 216 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 METTL21AQ8WXB1 218 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 FCGR1BQ92637 280 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 OMA1Q96E52 524 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 HSPBAP1Q96EW2 488 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 SLC38A2Q96QD8 506 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 TAS2R16Q9NYV7 291 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 CARD8Q9Y2G2 431 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 GPR52Q9Y2T5 361 aa20.45■□□□□ 0.86
SMAD1-201ENST00000302085 HEATR5AQ86XA9 2040 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 SAGE2PA6NJ88 616 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 DBTP11182 482 aaKnown RBP20.44■□□□□ 0.86
SMAD1-201ENST00000302085 UBL4AP11441 157 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 ST13P50502 369 aaKnown RBP20.44■□□□□ 0.86
SMAD1-201ENST00000302085 RNF4P78317 190 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 ZNF91Q05481 1191 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 PLCXD2Q0VAA5 305 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 MRPL14Q6P1L8 145 aaKnown RBP20.44■□□□□ 0.86
SMAD1-201ENST00000302085 CBLN3Q6UW01 205 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 CACTIN-AS1Q8N1I8 211 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 APCDD1LQ8NCL9 501 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 OR52D1Q9H346 318 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 UBQLN3Q9H347 655 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 HHATLQ9HCP6 504 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 ENPP5Q9UJA9 477 aa20.44■□□□□ 0.86
SMAD1-201ENST00000302085 M0R082 166 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 GTPBP1O00178 669 aaKnown RBP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 SURF4O15260 269 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 NOL3O60936 208 aaKnown RBP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 CPNE3O75131 537 aaKnown RBP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 PTP4A3O75365 173 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 CH25HO95992 272 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 ABCD3P28288 659 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 IL12BP29460 328 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 HSDL2Q6YN16 418 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 C17orf47Q8NEP4 570 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 OR13C2Q8NGS9 318 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 PMEPA1Q969W9 287 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 WDR77Q9BQA1 342 aaPredicted RBP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 PPIEQ9UNP9 301 aaKnown RBP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 A0A1W2PPW3 197 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 EFCAB9A8MZ26 197 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 GNB5O14775 395 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 FLRT2O43155 660 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 ZNF264O43296 627 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 PTHP01270 115 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 NR4A1P22736 598 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 COPZ1P61923 177 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 NCF4Q15080 339 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 OR2T33Q8NG76 320 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 DNAJA4Q8WW22 397 aaPredicted RBP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 C3orf49Q96BT1 292 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 GPN2Q9H9Y4 310 aaPredicted RBP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 EXOSC3Q9NQT5 275 aaKnown RBP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 FBXO8Q9NRD0 319 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.43■□□□□ 0.86
SMAD1-201ENST00000302085 SIGLEC7Q9Y286 467 aa20.43■□□□□ 0.86
SMAD1-201ENST00000302085 A0A087WUJ7 227 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 ADORA3P0DMS8 318 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 PNLIPRP2P54317 469 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 CTF1Q16619 201 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms