RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 MUS81Q96NY9 551 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 IGFLR1Q9H665 355 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ACACAQ13085 2346 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SERTM2A0A1B0GWG4 89 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC22A31A6NKX4 558 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 HPGDSO60760 199 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A6P0DMU7 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A5P0DMU8 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A7P0DMV0 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A8P0DMV1 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A9P0DMV2 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 OR13C7P0DN81 318 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 AREGP15514 252 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 GDI1P31150 447 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 PTGER4P35408 488 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ERVK-21P61565 698 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 FOXK1P85037 733 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A2Q5DJT8 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A1Q5HYN5 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CXCL17Q6UXB2 119 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CT45A3Q8NHU0 189 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SPTSSAQ969W0 71 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SCPEP1Q9HB40 452 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 EIF2B3Q9NR50 452 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 C1GALT1C1LP0DN25 315 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 RABGGTBP53611 331 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 HMGCS1Q01581 520 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ABHD18Q0P651 414 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 MAMDC2Q7Z304 686 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 OR5AK2Q8NH90 309 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SIRPGQ9P1W8 387 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 PCDHB3Q9Y5E6 796 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 TOX3O15405 576 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CAPNS1P04632 268 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SPI1P17947 270 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CLDN6P56747 220 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 LIPJQ5W064 366 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 FTHL17Q9BXU8 183 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 UCK1Q9HA47 277 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 NMUR1Q9HB89 426 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 EIF3FO00303 357 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 FAM189A1O60320 539 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 FLYWCH1Q4VC44 716 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 KCNJ9Q92806 393 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 HERPUD2Q9BSE4 406 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 STEAP1Q9UHE8 339 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 WIF1Q9Y5W5 379 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 FKBP1AP62942 108 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CCINQ13939 588 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 HES1Q14469 280 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 SGCAQ16586 387 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 PLCXD3Q63HM9 321 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 EEF1DP3Q658K8 133 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 BPHLQ86WA6 291 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 CERS5Q8N5B7 392 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 PIP5K1AQ99755 562 aa10.57□□□□□ -0.72
HDGFL3-201ENST00000299633 NCBP2LA6PVI3 153 aaKnown RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 TK1P04183 234 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 VIPR1P32241 457 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CYP27C1Q4G0S4 372 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 DYRK2Q92630 601 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 NAA11Q9BSU3 229 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SDCBP2Q9H190 292 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 C6orf47O95873 294 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 DSC2Q02487 901 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SOCS4Q8WXH5 440 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 LRR1Q96L50 414 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 OR51I2Q9H344 312 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CWH43Q9H720 699 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 PIGVQ9NUD9 493 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SYT13Q7L8C5 426 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 POM121Q96HA1 1249 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 UBL7Q96S82 380 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ATG101Q9BSB4 218 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 A0A1W2PQ67 120 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 AQP7O14520 342 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 PDGFAP04085 211 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CST2P09228 141 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SLC6A12P48065 614 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 MSMO1Q15800 293 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 TEX44Q53QW1 395 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ACTBL2Q562R1 376 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 TREML2Q5T2D2 321 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 VITQ6UXI7 678 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ZNF620Q6ZNG0 422 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SORBS1Q9BX66 1292 aaKnown RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ARV1Q9H2C2 271 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ZCCHC4Q9H5U6 513 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CDK14O94921 469 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 CRHBPP24387 322 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 NRLP54845 237 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 RPS18P62269 152 aaKnown RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 OPCMLQ14982 345 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 FAM163AQ96GL9 167 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 A6NDN8 102 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 GPR143P51810 404 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 ADAM5Q6NVV9 412 aa10.56□□□□□ -0.72
HDGFL3-201ENST00000299633 SBSNQ6UWP8 590 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms