RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ACOT11Q8WXI4 607 aaPredicted RBP12.51□□□□□ -0.41
CTDP1-202ENST00000299543 OSTF1Q92882 214 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 RBPMSQ93062 196 aaKnown RBP12.51□□□□□ -0.41
CTDP1-202ENST00000299543 C12orf57Q99622 126 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 KLHL21Q9UJP4 597 aa12.51□□□□□ -0.41
CTDP1-202ENST00000299543 H0Y8X5 98 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 PROM1O43490 865 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 RGS11O94810 467 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 ZIC2O95409 532 aaPredicted RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 EML2O95834 649 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 GYPBP06028 91 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 NUP62P37198 522 aaPredicted RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 OMPP47874 163 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TPMTP51580 245 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 VSX2P58304 361 aaPredicted RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TRA2BP62995 288 aaKnown RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TPBGQ13641 420 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TRMT12Q53H54 448 aaKnown RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 QSOX2Q6ZRP7 698 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 OR2T33Q8NG76 320 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 OR2L8Q8NGY9 312 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 DIO2Q92813 273 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TSACCQ96A04 125 aaPredicted RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 ACTRT3Q9BYD9 372 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 SLC17A9Q9BYT1 436 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 IFT22Q9H7X7 185 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 THAP10Q9P2Z0 257 aaPredicted RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 CHST2Q9Y4C5 530 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 PRUNE2Q8WUY3 3088 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TMEM129A0AVI4 362 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 H0YC42 278 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 ACSM4P0C7M7 580 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 BMP7P18075 431 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 PPM1FP49593 454 aaPredicted RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 POLR2GP62487 172 aaKnown RBP eCLIP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 CXXC5Q7LFL8 322 aaKnown RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 CXorf58Q96LI9 332 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TEX101Q9BY14 249 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 ENKD1Q9H0I2 346 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 NT5DC2Q9H857 520 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 FGF22Q9HCT0 170 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 FBXO34Q9NWN3 711 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 SF3B6Q9Y3B4 125 aaKnown RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 NDUFV2P19404 249 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 NOS3P29474 1203 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 PEBP1P30086 187 aaKnown RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 GAS1P54826 345 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 PGGHGQ32M88 737 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 KIAA1211LQ6NV74 962 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 CDC73Q6P1J9 531 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 CD300LDQ6UXZ3 194 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 GPAT4Q86UL3 456 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 NRROSQ86YC3 692 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 SIRT6Q8N6T7 355 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 SRFBP1Q8NEF9 429 aaKnown RBP12.5□□□□□ -0.41
CTDP1-202ENST00000299543 PFN4Q8NHR9 129 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 COQ8AQ8NI60 647 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 WDFY2Q96P53 400 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 IFT27Q9BW83 186 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 SRMSQ9H3Y6 488 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TBC1D29Q9UFV1 150 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 ARID1AO14497 2285 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 SPEGQ15772 3267 aa12.5□□□□□ -0.41
CTDP1-202ENST00000299543 TRAV20A0A0B4J274 112 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 DAPL1A0PJW8 107 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 POM121BA6NF01 834 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 CACNB4O00305 520 aaPredicted RBP12.49□□□□□ -0.41
CTDP1-202ENST00000299543 SURF4O15260 269 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 POU3F2P20265 443 aaPredicted RBP12.49□□□□□ -0.41
CTDP1-202ENST00000299543 NT5EP21589 574 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 GDI1P31150 447 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 ACVR1BP36896 505 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 ACTR1BP42025 376 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 ACTR1AP61163 376 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 MLC1Q15049 377 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 DUSP5Q16690 384 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 MSLNLQ96KJ4 702 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 RBP7Q96R05 134 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 TTYH1Q9H313 450 aaPredicted RBP12.49□□□□□ -0.41
CTDP1-202ENST00000299543 FGF20Q9NP95 211 aaPredicted RBP12.49□□□□□ -0.41
CTDP1-202ENST00000299543 USP36Q9P275 1121 aaKnown RBP12.49□□□□□ -0.41
CTDP1-202ENST00000299543 EXTL2Q9UBQ6 330 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 RAF1P04049 648 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 THY1P04216 161 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 HLA-DMAP28067 261 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 PPP3R1P63098 170 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 OR51L1Q8NGJ5 315 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 SPRTNQ9H040 489 aaPredicted RBP12.49□□□□□ -0.41
CTDP1-202ENST00000299543 UBQLN3Q9H347 655 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 ZFP64Q9NPA5 681 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 PCDHB16Q9NRJ7 776 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 HCN3Q9P1Z3 774 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 KIAA1671Q9BY89 1806 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 IRGMA1A4Y4 181 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 J3QLW9 94 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 PEX12O00623 359 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 BET1O15155 118 aa12.49□□□□□ -0.41
CTDP1-202ENST00000299543 MAGEB4O15481 346 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms