RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 C14orf105Q9NVL8 296 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 CDH10Q9Y6N8 788 aa23.54■■□□□ 1.36
SDCCAG3-201ENST00000298537 ZNF354AO60765 605 aaPredicted RBP23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 CCR4P51679 360 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 CLDN6P56747 220 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 OR51A7Q8NH64 312 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 COPS7AQ9UBW8 275 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 MED31Q9Y3C7 131 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 LNP1A1A4G5 178 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 TRIM64BA6NI03 449 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 MRPS14O60783 128 aaKnown RBP23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 CSTF2P33240 577 aaKnown RBP eCLIP23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 PSMD4P55036 377 aaKnown RBP23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 NFATC3Q12968 1075 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 OCLNQ16625 522 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 PLAG1Q6DJT9 500 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 BMPERQ8N8U9 685 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 BBS1Q8NFJ9 593 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 SH3YL1Q96HL8 342 aaPredicted RBP23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 ZNF426Q9BUY5 554 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 TRIM2Q9C040 744 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 UBQLN3Q9H347 655 aa23.53■■□□□ 1.36
SDCCAG3-201ENST00000298537 EFCAB10A6NFE3 127 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 SAGP10523 405 aaPredicted RBP23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 HPGDP15428 266 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 CCNA2P20248 432 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 PGGHGQ32M88 737 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 CCDC157Q569K6 752 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 SHFQ7M4L6 423 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 OVCH1Q7RTY7 1134 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 ZNF550Q7Z398 422 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 ANKRD13BQ86YJ7 626 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 TMEM163Q8TC26 289 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 FANK1Q8TC84 345 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 RAB2BQ8WUD1 216 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 SPSB2Q99619 263 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 CFL2Q9Y281 166 aa23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 COL5A1P20908 1838 aaPredicted RBP23.52■■□□□ 1.36
SDCCAG3-201ENST00000298537 TTC36A6NLP5 189 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 SURF4O15260 269 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 WISP1O95388 367 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 MST1P26927 711 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 ZFP36L1Q07352 338 aaKnown RBP23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 SLC35F1Q5T1Q4 408 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 HLA-DQA1Q5Y7H0 255 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 RNF113BQ8IZP6 322 aaKnown RBP23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 APCDD1LQ8NCL9 501 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 OSTF1Q92882 214 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 CNOT2Q9NZN8 540 aaKnown RBP23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 FAM183AA6NL82 134 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 MEN1O00255 615 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 ALOX12BO75342 701 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 ABCD3P28288 659 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 ST13P50502 369 aaKnown RBP23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 CRYZQ08257 329 aaKnown RBP23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 SKP2Q13309 424 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 FCRLBQ6BAA4 426 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 SMARCD3Q6STE5 483 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 LINC00114Q6XXX2 140 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 SLCO6A1Q86UG4 719 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 LRRC17Q8N6Y2 441 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 ZNF441Q8N8Z8 693 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 FAM71CQ8NEG0 241 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 WDR36Q8NI36 951 aaKnown RBP23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 OMA1Q96E52 524 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 Q96MT0 163 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 RXFP3Q9NSD7 469 aa23.51■■□□□ 1.35
SDCCAG3-201ENST00000298537 SCDO00767 359 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 HSMCR30P0CW71 290 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 GRK5P34947 590 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 PLCXD2Q0VAA5 305 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 TIGD6Q17RP2 521 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 MARCH3Q86UD3 253 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 TMCO5AQ8N6Q1 288 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 NFAM1Q8NET5 270 aaPredicted RBP23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 C3orf49Q96BT1 292 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 HS6ST2Q96MM7 605 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 WDR77Q9BQA1 342 aaPredicted RBP23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 SIGLEC7Q9Y286 467 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 TSPAN2O60636 221 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 NOL3O60936 208 aaKnown RBP23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 CD36P16671 472 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 GAS1P54826 345 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 VBP1P61758 197 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 FHL1Q13642 323 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 ZNF528Q3MIS6 628 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 ULK3Q6PHR2 472 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 B3GLCTQ6Y288 498 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 TMPRSS11FQ6ZWK6 438 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 SLC29A4Q7RTT9 530 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 CMIPQ8IY22 773 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 RHBDD1Q8TEB9 315 aa23.5■■□□□ 1.35
SDCCAG3-201ENST00000298537 LDOC1O95751 146 aaPredicted RBP23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 UBL4AP11441 157 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 FGF5P12034 268 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 DUSP3P51452 185 aaPredicted RBP23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 NCS1P62166 190 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 RNF4P78317 190 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 GXYLT1Q4G148 440 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 ALDH16A1Q8IZ83 802 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms