RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 CLCNKAP51800 687 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 WNT3AP56704 352 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SCAND1P57086 179 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ACSM1Q08AH1 577 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM35AQ53FP2 167 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM97Q5BJF2 176 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 BRAT1Q6PJG6 821 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 CARFQ8N187 725 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PRSS35Q8N3Z0 413 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 AGBL3Q8NEM8 1001 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 C2orf15Q8WU43 125 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SLC30A3Q99726 388 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ZDHHC2Q9UIJ5 367 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 A8MUA0 341 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PNMTP11086 282 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ACP2P11117 423 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 GIFP27352 417 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 HTR3AP46098 478 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 C19orf57Q0VDD7 668 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 CEBPEQ15744 281 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 METTL7BQ6UX53 244 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 CNTN4Q8IWV2 1026 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 FDXACB1Q9BRP7 624 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PTDSS2Q9BVG9 487 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SDR39U1Q9NRG7 319 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 NFASCO94856 1347 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 BRCA1P38398 1863 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 E5RJQ4 531 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SLC16A5O15375 505 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 FGF4P08620 206 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 CBLP22681 906 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SLC6A9P48067 706 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ADPRHP54922 357 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 MTPNP58546 118 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 RAB33AQ14088 237 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 HIST3H3Q16695 136 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TIGITQ495A1 244 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 C5orf46Q6UWT4 87 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 EIF4E3Q8N5X7 224 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 WDR55Q9H6Y2 383 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 GALNT9Q9HCQ5 603 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF275Q9NSD4 429 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 GJB4Q9NTQ9 266 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 NFS1Q9Y697 457 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 C5orf52A6NGY3 159 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 CCKBRP32239 447 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 LAMTOR4Q0VGL1 99 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PPA1Q15181 289 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 DECR1Q16698 335 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 LSRQ86X29 649 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 BLNKQ8WV28 456 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PEBP4Q96S96 227 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PKMYT1Q99640 499 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 MAP3K3Q99759 626 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 OR10A5Q9H207 317 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF552Q9H707 407 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 NOX3Q9HBY0 568 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 PURGQ9UJV8 347 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 DNMT3AQ9Y6K1 912 aaPredicted RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 ACACBO00763 2458 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 NIPSNAP2O75323 286 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 A1BGP04217 495 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 RARRES1P49788 294 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 BLKP51451 505 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 MALLQ13021 153 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SLC14A2Q15849 920 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 CTU2Q2VPK5 515 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 SNRNP25Q9BV90 132 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 NMNAT2Q9BZQ4 307 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 AGO1Q9UL18 857 aaKnown RBP4.58□□□□□ -1.68
CSMD3-201ENST00000297405 DNAJC15Q9Y5T4 150 aa4.58□□□□□ -1.68
CSMD3-201ENST00000297405 TCRBV3S1A0A5B6 114 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 GLTPD2A6NH11 291 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 RHOQP17081 205 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 NPY4RP50391 375 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ATXN7L3Q14CW9 347 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 MLC1Q15049 377 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PLGLAQ15195 96 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 IGSF11Q5DX21 431 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 DGAT2L6Q6ZPD8 337 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 UBA3Q8TBC4 463 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ALG8Q9BVK2 526 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ENKD1Q9H0I2 346 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 GAL3ST2Q9H3Q3 398 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 METTL17Q9H7H0 456 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 RDH14Q9HBH5 336 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TAF9BQ9HBM6 251 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 USP36Q9P275 1121 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 POU2F3Q9UKI9 436 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 KCTD3Q9Y597 815 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 NOX1Q9Y5S8 564 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 LCTP09848 1927 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 A0A0B4J203 849 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 A0A1W2PPQ1 181 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ACTL6BO94805 426 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 JUNP05412 331 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 AKR1C4P17516 323 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 AVPR1BP47901 424 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 EFEMP1Q12805 493 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PLK5Q496M5 336 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms