RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 UCKL1Q9NWZ5 548 aa10.87□□□□□ -0.67
RHO-201ENST00000296271 DNAJB12Q9NXW2 375 aaKnown RBP10.87□□□□□ -0.67
RHO-201ENST00000296271 TNFRSF10DQ9UBN6 386 aa10.87□□□□□ -0.67
RHO-201ENST00000296271 POU2F3Q9UKI9 436 aa10.87□□□□□ -0.67
RHO-201ENST00000296271 CACNA1CQ13936 2221 aa10.87□□□□□ -0.67
RHO-201ENST00000296271 ARID1BQ8NFD5 2236 aaPredicted RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 IGHV1OR15-9A0A0B4J2B8 117 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 A0A1B0GVC2 190 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 A0A1W2PQ09 198 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 A6NIN4 97 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 ATP6V1G1O75348 118 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 NKX2-2O95096 273 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 AGR2O95994 175 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 SLC35E2P0CK97 266 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 HTR1FP30939 366 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 ETV6P41212 452 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 RFX2P48378 723 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 E2F1Q01094 437 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 FHL1Q13642 323 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 KIRREL2Q6UWL6 708 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 TMEM91Q6ZNR0 172 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 GLCCI1Q86VQ1 547 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 MARCH9Q86YJ5 346 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 OR10H4Q8NGA5 316 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 EFHD2Q96C19 240 aaPredicted RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 SENP5Q96HI0 755 aaPredicted RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 KCTD7Q96MP8 289 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 FOXQ1Q9C009 403 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 ZNF346Q9UL40 294 aaKnown RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 GRIP1Q9Y3R0 1128 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 CMAHPQ9Y471 501 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 SAGE2PA6NJ88 616 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 A8MV72 311 aaPredicted RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 GABRPO00591 440 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 SNPHO15079 494 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 OIP5O43482 229 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 CRYZQ08257 329 aaKnown RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 P2RY14Q15391 338 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 PRTGQ2VWP7 1150 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 AMZ1Q400G9 498 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 EIPR1Q53HC9 387 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 ZNF322Q6U7Q0 402 aaPredicted RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 FAM131AQ6UXB0 335 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 GJD3Q8N144 294 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 ZNF655Q8N720 491 aaPredicted RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 ARIH2OSQ8N7S6 290 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 Q8N9G6 341 aaPredicted RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 OR13C5Q8NGS8 318 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 RBM18Q96H35 190 aaKnown RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 DIRAS2Q96HU8 199 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 VSTM2LQ96N03 204 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 STACQ99469 402 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 SRRQ9GZT4 340 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 MMP28Q9H239 520 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 TRPV5Q9NQA5 729 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 GPR27Q9NS67 375 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 H2AFY2Q9P0M6 372 aaPredicted RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 SATB2Q9UPW6 733 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 EXOSC1Q9Y3B2 195 aaKnown RBP10.86□□□□□ -0.67
RHO-201ENST00000296271 ADAM18Q9Y3Q7 739 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 PCNX3Q9H6A9 2034 aa10.86□□□□□ -0.67
RHO-201ENST00000296271 FREM2Q5SZK8 3169 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 J3QRE1 110 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 SLC30A4O14863 429 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 CASKO14936 926 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 TFECO14948 347 aaPredicted RBP10.85□□□□□ -0.67
RHO-201ENST00000296271 HPGDSO60760 199 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 IGHA1P01876 353 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 CT45A8P0DMV1 189 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 CT45A9P0DMV2 189 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 DRD5P21918 477 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 APEX1P27695 318 aaKnown RBP10.85□□□□□ -0.67
RHO-201ENST00000296271 OR1D4P47884 311 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 EFNA3P52797 238 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 RUNX1T1Q06455 604 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 CDC20Q12834 499 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 CT45A2Q5DJT8 189 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 IL20RBQ6UXL0 311 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 C7orf57Q8NEG2 295 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 TSTD1Q8NFU3 115 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 C16orf52Q8NHV5 167 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 ZPLD1Q8TCW7 415 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 BRIX1Q8TDN6 353 aaKnown RBP10.85□□□□□ -0.67
RHO-201ENST00000296271 NECTIN4Q96NY8 510 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 ZNF559Q9BR84 538 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 SP140LQ9H930 580 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 CRNNQ9UBG3 495 aaPredicted RBP10.85□□□□□ -0.67
RHO-201ENST00000296271 EXOGQ9Y2C4 368 aaKnown RBP10.85□□□□□ -0.67
RHO-201ENST00000296271 UGT2A1Q9Y4X1 527 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 EML5Q05BV3 1969 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 A0A0B4J2E0 115 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 A0A1B0GX12 115 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 A0A1W2PPK0 400 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 ISPDA4D126 451 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 STK25O00506 426 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 SERPINI2O75830 405 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 WISP1O95388 367 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 CSF2P04141 144 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 IFNA16P05015 189 aa10.85□□□□□ -0.67
RHO-201ENST00000296271 IL7P13232 177 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms