RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 LPCAT3Q6P1A2 487 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 TSSK4Q6SA08 328 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 DNM1P46Q6ZS02 220 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 PUSL1Q8N0Z8 303 aaKnown RBP13.24□□□□□ -0.29
FUBP1-201ENST00000294623 BMPERQ8N8U9 685 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 TMEM169Q96HH4 297 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 ARHGDIGQ99819 225 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 GINS4Q9BRT9 223 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 AUNIPQ9H7T9 357 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 ISG20L2Q9H9L3 353 aaKnown RBP13.24□□□□□ -0.29
FUBP1-201ENST00000294623 LTBP3Q9NS15 1303 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 HELZP42694 1942 aaKnown RBP13.24□□□□□ -0.29
FUBP1-201ENST00000294623 A0A1B0GVC2 190 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 A6NIN4 97 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 ZNF879B4DU55 563 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 M0R3H8 397 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 UBE2CO00762 179 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 OR4Q2P0C623 313 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 C1GALT1C1LP0DN25 315 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 NDUFV2P19404 249 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 NT5EP21589 574 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 MANFP55145 182 aaKnown RBP13.24□□□□□ -0.29
FUBP1-201ENST00000294623 SRSF4Q08170 494 aaKnown RBP13.24□□□□□ -0.29
FUBP1-201ENST00000294623 TEX30Q5JUR7 227 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 FAM26DQ5JW98 314 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 C6orf132Q5T0Z8 1188 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 VRK3Q8IV63 474 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 C2orf15Q8WU43 125 aaKnown RBP13.24□□□□□ -0.29
FUBP1-201ENST00000294623 SLC35G5Q96KT7 338 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 PGLYRP3Q96LB9 341 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 GPR62Q9BZJ7 368 aa13.24□□□□□ -0.29
FUBP1-201ENST00000294623 ZNF768Q9H5H4 540 aaKnown RBP13.24□□□□□ -0.29
FUBP1-201ENST00000294623 MRPL17Q9NRX2 175 aaKnown RBP13.24□□□□□ -0.29
FUBP1-201ENST00000294623 BCL2L11O43521 198 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 B4GALT3O60512 393 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 CALCBP10092 127 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 NR2F1P10589 423 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 SLC25A4P12235 298 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 DDX6P26196 483 aaKnown RBP eCLIP13.23□□□□□ -0.298e-13■□□□□ 8.4
FUBP1-201ENST00000294623 SERPINA4P29622 427 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 CXADRP78310 365 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 ECH1Q13011 328 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 SNTB1Q13884 538 aaKnown RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 GAS6Q14393 721 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 LINC00303Q3SY05 128 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 RNASE12Q5GAN4 147 aaKnown RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 ADGRF1Q5T601 910 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 TMEM185AQ8NFB2 350 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 OR51G2Q8NGK0 314 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 OR5D16Q8NGK9 328 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 OR6T1Q8NGN1 323 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 OR52I2Q8NH67 350 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 OR14A16Q8NHC5 309 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 NANPQ8TBE9 248 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 MED8Q96G25 268 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 PARK7Q99497 189 aaKnown RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 SEBOXQ9HB31 216 aaPredicted RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 TCF7L1Q9HCS4 588 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 TMEM138Q9NPI0 162 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 HINT3Q9NQE9 182 aaKnown RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 ZNF629Q9UEG4 869 aaPredicted RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 PLEKHM1Q9Y4G2 1056 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 ETV7Q9Y603 341 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 CKAP5Q14008 2032 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 OGG1O15527 345 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 KLHL18O94889 574 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 SPDEFO95238 335 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 HTR3BO95264 441 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 POMCP01189 267 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 MELTFP08582 738 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 ZNF35P13682 527 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 GNSP15586 552 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 EPCAMP16422 314 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 PAN3Q58A45 887 aaKnown RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 GAREM2Q75VX8 874 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 SERPINA12Q8IW75 414 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 CMTM4Q8IZR5 234 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 CCDC107Q8WV48 283 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 S100A16Q96FQ6 103 aaKnown RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 MRPL48Q96GC5 212 aaKnown RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 TIMP4Q99727 224 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 TINF2Q9BSI4 451 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 RSPO3Q9BXY4 272 aaPredicted RBP13.23□□□□□ -0.29
FUBP1-201ENST00000294623 SEC11CQ9BY50 192 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 NRIP3Q9NQ35 241 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 HAO2Q9NYQ3 351 aa13.23□□□□□ -0.29
FUBP1-201ENST00000294623 TTC3P53804 2025 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 DVL2O14641 736 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 IGSF6O95976 241 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 CD8AP01732 235 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 DPEP1P16444 411 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 IMPA1P29218 277 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 HCCSP53701 268 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 SSBP1Q04837 148 aaKnown RBP13.22□□□□□ -0.29
FUBP1-201ENST00000294623 SLBPQ14493 270 aaKnown RBP eCLIP13.22□□□□□ -0.29
FUBP1-201ENST00000294623 Q3ZCU0 254 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 PRAMEF19Q5SWL8 479 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 SPOUT1Q5T280 376 aaKnown RBP13.22□□□□□ -0.29
FUBP1-201ENST00000294623 TMPRSS11BQ86T26 416 aa13.22□□□□□ -0.29
FUBP1-201ENST00000294623 THAP6Q8TBB0 222 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms