RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 WASF3Q9UPY6 502 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 ACOD1A6NK06 481 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 CAV2P51636 162 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 ADARB1P78563 741 aaKnown RBP14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 OR52I1Q8NGK6 324 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 ARNT2Q9HBZ2 717 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 VSX1Q9NZR4 365 aaPredicted RBP14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 TAF1P21675 1872 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 CCDC163A0A0D9SF12 145 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 A0A0U1RQK1 487 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 METTL15A6NJ78 407 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 EIF3FO00303 357 aaPredicted RBP14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 BDKRB2P30411 391 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 CLDN2P57739 230 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 MEX3BQ6ZN04 569 aaKnown RBP14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 OR52E1Q8NGJ3 308 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 MR1Q95460 341 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 C16orf58Q96GQ5 468 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 SAMD11Q96NU1 681 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 RNF32Q9H0A6 362 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 MYH9P35579 1960 aaKnown RBP14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 DNAJC25-GNG10A0A024R161 153 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 PNMTP11086 282 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 TIMP2P16035 220 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 GABRR1P24046 479 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 RPS5P46782 204 aaKnown RBP14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 ERV3-1Q14264 604 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 FCN2Q15485 313 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 ZNF679Q8IYX0 411 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 ACKR4Q9NPB9 350 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 NPAP1Q9NZP6 1156 aa14.37□□□□□ -0.11
SHROOM4-201ENST00000289292 N4BP2Q86UW6 1770 aaPredicted RBP14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 SOCS6O14544 535 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 CASC3O15234 703 aaKnown RBP14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 GABRA5P31644 462 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 FASLGP48023 281 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 AKR1C8PQ5T2L2 129 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 PXDC1Q5TGL8 231 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 CBARPQ8N350 705 aaPredicted RBP14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 GPR148Q8TDV2 347 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 KLHL15Q96M94 604 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 PGAP2Q9UHJ9 254 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 USP3Q9Y6I4 520 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 OR2A25A4D2G3 310 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 PRAF2O60831 178 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 IDUAP35475 653 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 GP2P55259 537 aaKnown RBP14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 SLC38A5Q8WUX1 472 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 ZBTB8AQ96BR9 441 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 PDE7BQ9NP56 450 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 NAP1L6A6NFF2 107 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 GABARAPO95166 117 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 WDPCPO95876 746 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 IL13RA1P78552 427 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 RIPPLY1Q0D2K3 151 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 PARS2Q7L3T8 475 aaKnown RBP14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 SFXN5Q8TD22 340 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 ZDHHC12Q96GR4 267 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 VRK1Q99986 396 aaPredicted RBP14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 SLC17A9Q9BYT1 436 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 CSNK1G1Q9HCP0 422 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 CRYBG1Q9Y4K1 1723 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 H7C1C5 153 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 KLK3P07288 261 aaPredicted RBP14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 PRPS1P60891 318 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 LCN6P62502 163 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 ELOCQ15369 112 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 NSDHLQ15738 373 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 INAVAQ3KP66 663 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 ZNF585AQ6P3V2 769 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 FANCFQ9NPI8 374 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 LCMT2O60294 686 aaKnown RBP14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 ZNF750Q32MQ0 723 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 SHISA6Q6ZSJ9 500 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 AMBRA1Q9C0C7 1298 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 APMAPQ9HDC9 416 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 NAALAD2Q9Y3Q0 740 aa14.36□□□□□ -0.11
SHROOM4-201ENST00000289292 VSTM2BA6NLU5 285 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 SYPP08247 313 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 SFTPDP35247 375 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 HHEXQ03014 270 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ANKLE1Q8NAG6 615 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 DUSP19Q8WTR2 217 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ST8SIA2Q92186 375 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 GPATCH2Q9NW75 528 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 C19orf25Q9UFG5 118 aaPredicted RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 VDAC3Q9Y277 283 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 MRPS17Q9Y2R5 130 aaKnown RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 BACE2Q9Y5Z0 518 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 SSX4O60224 188 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 OPCMLQ14982 345 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 UNQ6126/PRO20091Q6UXV3 157 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ZNF440Q8IYI8 595 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ACOT11Q8WXI4 607 aaPredicted RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 HHIPL1Q96JK4 782 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ZFYVE21Q9BQ24 234 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 SRPX2O60687 465 aaPredicted RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 CHRNEQ04844 493 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 FAM122CQ6P4D5 195 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ALKAL1Q6UXT8 129 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms