RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 FLYWCH1Q4VC44 716 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 PDZK1Q5T2W1 519 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 PLXDC2Q6UX71 529 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 SZRD1Q7Z422 152 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 IFNEQ86WN2 208 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 PM20D2Q8IYS1 436 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 C9orf106Q8NAJ2 232 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 GATSQ8NAP1 163 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 TOR1AIP2Q8NFQ8 470 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 OR5M1Q8NGP8 315 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 OR14L1PQ8NHC6 308 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 B4GALNT2Q8NHY0 566 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 DYDC1Q8WWB3 177 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 JADE3Q92613 823 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 UCK2Q9BZX2 261 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 MTHFD2LQ9H903 347 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-201ENST00000288344 HHATLQ9HCP6 504 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 BCL2L10Q9HD36 194 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 SAR1AQ9NR31 198 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 FGFR1OP2Q9NVK5 253 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 CCDC167Q9P0B6 97 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 SUCOQ9UBS9 1254 aaKnown RBP8.25□□□□□ -1.09
HMGN1-201ENST00000288344 LIPT1Q9Y234 373 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 CARD8Q9Y2G2 431 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 L3MBTL1Q9Y468 752 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 AP4B1Q9Y6B7 739 aa8.25□□□□□ -1.09
HMGN1-201ENST00000288344 POLQO75417 2590 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 SPG11Q96JI7 2443 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 FREM1Q5H8C1 2179 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 ABCA4P78363 2273 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 CLIC1O00299 241 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 SYT5O00445 386 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 SCDO00767 359 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 TNFSF13O75888 250 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 IL18BPO95998 194 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 PEPDP12955 493 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 PRF1P14222 555 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 PRKCAP17252 672 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 HTR1EP28566 365 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 SHC1P29353 583 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 CHRNB4P30926 498 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 SOAT1P35610 550 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 CLK3P49761 638 aaKnown RBP8.24□□□□□ -1.09
HMGN1-201ENST00000288344 SUMO3P55854 103 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-201ENST00000288344 RAC1P63000 192 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 KCNJ10P78508 379 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 FOXF2Q12947 444 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 STX5Q13190 355 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 GPR68Q15743 365 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 AGKQ53H12 422 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 RUNDC3AQ59EK9 446 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 AAGABQ6PD74 315 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 ENPP6Q6UWR7 440 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 LACC1Q8IV20 430 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 EID3Q8N140 333 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF619Q8N2I2 560 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 ARFGAP2Q8N6H7 521 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 METTL25Q8N6Q8 603 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 TRIML2Q8N7C3 387 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 RELL2Q8NC24 303 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-201ENST00000288344 OR4K17Q8NGC6 315 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 OR5W2Q8NH69 310 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 PHOSPHO1Q8TCT1 267 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 C10orf82Q8WW14 230 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 ZBTB8AQ96BR9 441 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 SDCCAG3Q96C92 435 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 ZBTB18Q99592 522 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 SPOCK3Q9BQ16 436 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 QRSL1Q9H0R6 528 aaKnown RBP8.24□□□□□ -1.09
HMGN1-201ENST00000288344 ACBD3Q9H3P7 528 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 PTGES2Q9H7Z7 377 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 EXOSC3Q9NQT5 275 aaKnown RBP8.24□□□□□ -1.09
HMGN1-201ENST00000288344 EXD2Q9NVH0 621 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF629Q9UEG4 869 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-201ENST00000288344 RPH3AQ9Y2J0 694 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-201ENST00000288344 PRR14LQ5THK1 2151 aa8.24□□□□□ -1.09
HMGN1-201ENST00000288344 OTOGQ6ZRI0 2925 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 A0A0J9YW62 118 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 CLCA1A8K7I4 914 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 FXYD1O00168 92 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 FAAHO00519 579 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 ZNF264O43296 627 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 KRT75O95678 551 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 CGAP01215 116 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 ATP6V1C1P21283 382 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 OPRM1P35372 400 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 CHI3L1P36222 383 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-201ENST00000288344 ACAA2P42765 397 aaKnown RBP8.23□□□□□ -1.09
HMGN1-201ENST00000288344 PCYT1AP49585 367 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 KHKP50053 298 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 EEF1A1P68104 462 aaKnown RBP8.23□□□□□ -1.09
HMGN1-201ENST00000288344 FADDQ13158 208 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 PRAMEF8Q5VWM4 474 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 PRAMEF7Q5VXH5 474 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 COMTD1Q86VU5 262 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 GRAMD2AQ8IUY3 354 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 PNPT1Q8TCS8 783 aaKnown RBP8.23□□□□□ -1.09
HMGN1-201ENST00000288344 ASB5Q8WWX0 329 aa8.23□□□□□ -1.09
HMGN1-201ENST00000288344 CNOT9Q92600 299 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms