RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 CCSAPQ6IQ19 270 aaPredicted RBP17.31■□□□□ 0.36
PCDH1-201ENST00000287008 ABHD17CQ6PCB6 329 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 FAM160A2Q8N612 972 aaPredicted RBP17.31■□□□□ 0.36
PCDH1-201ENST00000287008 MRGPRX1Q96LB2 322 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 SAP130Q9H0E3 1048 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 C17orf67Q0P5P2 114 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 C18orf63Q68DL7 685 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 OR5L1Q8NGL2 311 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 TCEAL3Q969E4 200 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 BIRC8Q96P09 236 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 LMF1Q96S06 567 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 CDC6Q99741 560 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 HINT2Q9BX68 163 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 SYT4Q9H2B2 425 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 UBE2J1Q9Y385 318 aaPredicted RBP17.31■□□□□ 0.36
PCDH1-201ENST00000287008 ASXL3Q9C0F0 2248 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 DCDC2BA2VCK2 349 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 OR7A17O14581 309 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 IFNA7P01567 189 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 MYF6P23409 242 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 ACTBP60709 375 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 ACTG1P63261 375 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 NKAIN1Q4KMZ8 207 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 FRMPD2BQ6IN97 320 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 PODNL1Q6PEZ8 512 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 FAM83HQ6ZRV2 1179 aaPredicted RBP17.31■□□□□ 0.36
PCDH1-201ENST00000287008 GCDHQ92947 438 aaPredicted RBP17.31■□□□□ 0.36
PCDH1-201ENST00000287008 DYNLRB1Q9NP97 96 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 ALDOCP09972 364 aaKnown RBP17.31■□□□□ 0.36
PCDH1-201ENST00000287008 FBXO45P0C2W1 286 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 NPPBP16860 134 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 TSFMP43897 325 aaKnown RBP17.31■□□□□ 0.36
PCDH1-201ENST00000287008 CCR5P51681 352 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 PYCR3Q53H96 274 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 SYCE2Q6PIF2 218 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 CLEC14AQ86T13 490 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 FBXO27Q8NI29 283 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 RAB9BQ9NP90 201 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 KLHL13Q9P2N7 655 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 TBC1D29Q9UFV1 150 aa17.31■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF749O43361 778 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 MPIG6BO95866 241 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 AKR1D1P51857 326 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 DPTQ07507 201 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 SLC22A10Q63ZE4 541 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 MEX3DQ86XN8 651 aaKnown RBP17.3■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF417Q8TAU3 575 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 RRNAD1Q96FB5 475 aaKnown RBP17.3■□□□□ 0.36
PCDH1-201ENST00000287008 TAS2R8Q9NYW2 309 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 POLHQ9Y253 713 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 CACNA1SQ13698 1873 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 EVPLQ92817 2033 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 FAM155AB1AL88 458 aaPredicted RBP17.3■□□□□ 0.36
PCDH1-201ENST00000287008 DPP4P27487 766 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 AKR1C2P52895 323 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 HSD17B7P56937 341 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 C5orf46Q6UWT4 87 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 ELMOD2Q8IZ81 293 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 OR8H3Q8N146 312 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF471Q9BX82 626 aaPredicted RBP17.3■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF350Q9GZX5 532 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 PRDM9Q9NQV7 894 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 TMEM30AQ9NV96 361 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 TRAV27A0A087WT01 109 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 LCKP06239 509 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 NPR2P20594 1047 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 MZT1Q08AG7 82 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 WBP2Q969T9 261 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 C16orf58Q96GQ5 468 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 PHOX2BQ99453 314 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 IL21Q9HBE4 155 aa17.3■□□□□ 0.36
PCDH1-201ENST00000287008 K7ESM1 405 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 RAD1O60671 282 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 MAP2K3P46734 347 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 TMEM205Q6UW68 189 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 DTX3Q8N9I9 347 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 ZNF597Q96LX8 424 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 B3GNT3Q9Y2A9 372 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 SERINC4A6NH21 518 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 DENRO43583 198 aaKnown RBP17.29■□□□□ 0.36
PCDH1-201ENST00000287008 SLC2A5P22732 501 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 SLC19A1P41440 591 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 RPS5P46782 204 aaKnown RBP17.29■□□□□ 0.36
PCDH1-201ENST00000287008 GPR19Q15760 415 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 CPT1CQ8TCG5 803 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 LYSMD1Q96S90 227 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 ABRACLQ9P1F3 81 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 RABL2AQ9UBK7 228 aaPredicted RBP17.29■□□□□ 0.36
PCDH1-201ENST00000287008 NUP50Q9UKX7 468 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 HHLA2Q9UM44 414 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 PCDHB10Q9UN67 800 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 RABL2BQ9UNT1 228 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 ST14Q9Y5Y6 855 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 SLC22A7Q9Y694 548 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 ALOX12BO75342 701 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 WDPCPO95876 746 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 FURINP09958 794 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 RAC2P15153 192 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 IFNGR1P15260 489 aa17.29■□□□□ 0.36
PCDH1-201ENST00000287008 CCSMST1Q4G0I0 132 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms