RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 GIFP27352 417 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 THBS2P35442 1172 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 ERVK-21P61565 698 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 CDK3Q00526 305 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 RPL13AP3Q6NVV1 102 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 B3GLCTQ6Y288 498 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 BTN2A1Q7KYR7 527 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 RNF113BQ8IZP6 322 aaKnown RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 OR2L5Q8NG80 312 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 SPRYD4Q8WW59 207 aaPredicted RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 MARC2Q969Z3 335 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 FAM46AQ96IP4 442 aaKnown RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 ABHD1Q96SE0 405 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 TIMP4Q99727 224 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 C7orf50Q9BRJ6 194 aaKnown RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 ACTRT3Q9BYD9 372 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 TMEM168Q9H0V1 697 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 SLC6A15Q9H2J7 730 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 SLC13A4Q9UKG4 626 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 ZFR2Q9UPR6 939 aaKnown RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 BAIAP2Q9UQB8 552 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 GPR52Q9Y2T5 361 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 DUXAA6NLW8 204 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 SC5DO75845 299 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 THBS1P07996 1170 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 SLC35G4P0C7Q5 338 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 NDUFV2P19404 249 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 PSMB5P28074 263 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 RAB28P51157 221 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 TGM3Q08188 693 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 LASP1Q14847 261 aaKnown RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 ZMYND11Q15326 602 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 EXOSC6Q5RKV6 272 aaKnown RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 C3P1Q6ZMU1 363 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 NR2C2APQ86WQ0 139 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 CMIPQ8IY22 773 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 SLC43A2Q8N370 569 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 HDDC3Q8N4P3 179 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 OR4F15Q8NGB8 312 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 OR56B4Q8NH76 319 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 RPLP0P6Q8NHW5 317 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 GANCQ8TET4 914 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 ELP4Q96EB1 424 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 MS4A3Q96HJ5 214 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 TIMM29Q9BSF4 260 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 SPRTNQ9H040 489 aaPredicted RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 BABAM2Q9NXR7 383 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 PTGFRNQ9P2B2 879 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 HRH3Q9Y5N1 445 aa9.64□□□□□ -0.87
SKA1-201ENST00000285116 MDC1Q14676 2089 aaKnown RBP9.64□□□□□ -0.87
SKA1-201ENST00000285116 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 G3V3Q6 166 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 PLPP2O43688 288 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 AIFM1O95831 613 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 MPIP34949 423 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 TRHRP34981 398 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 BCL6P41182 706 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 TAS2R43P59537 309 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 RAB8AP61006 207 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 HTRA4P83105 476 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 MAP4K2Q12851 820 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 STK11Q15831 433 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 RGS7BPQ6MZT1 257 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 NIPAL3Q6P499 406 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 NLRC3Q7RTR2 1065 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 KANSL1Q7Z3B3 1105 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 GDF7Q7Z4P5 450 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 PXKQ7Z7A4 578 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 C12orf40Q86WS4 652 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 ACBD7Q8N6N7 88 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 LILRB1Q8NHL6 650 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 SLC2A12Q8TD20 617 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 POF1BQ8WVV4 589 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 CDCP1Q9H5V8 836 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 CNIH4Q9P003 139 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 ZNF223Q9UK11 482 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 TMEM5Q9Y2B1 443 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 GPR55Q9Y2T6 319 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 A8MXK9 166 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 HYAL3O43820 417 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 FMO6PO60774 539 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 HRGP04196 525 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 THY1P04216 161 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 ALPPL2P10696 532 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 RPS4Y1P22090 263 aaKnown RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 ZP1P60852 638 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 TSPAN5P62079 268 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 GAB4Q2WGN9 574 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 ZNF791Q3KP31 576 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 EIPR1Q53HC9 387 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 TMEM240Q5SV17 173 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 CLVS2Q5SYC1 327 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 FAM198BQ6UWH4 519 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 IL20RBQ6UXL0 311 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 RRM2BQ7LG56 351 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 SIAH3Q8IW03 269 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 C2orf73Q8N5S3 287 aaPredicted RBP9.63□□□□□ -0.87
SKA1-201ENST00000285116 ACOT4Q8N9L9 421 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 PMM1Q92871 262 aa9.63□□□□□ -0.87
SKA1-201ENST00000285116 NXPE3Q969Y0 559 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms