RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 THBS1P07996 1170 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 ATP12AP54707 1039 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 NR1H2P55055 460 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 SLC35F1Q5T1Q4 408 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 GPR107Q5VW38 600 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 SIGIRRQ6IA17 410 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 NAXDQ8IW45 347 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 SPARTQ8N0X7 666 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 OR1N1Q8NGS0 311 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 METTL21AQ8WXB1 218 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 HDAC2Q92769 488 aaKnown RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 HOXB13Q92826 284 aaPredicted RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 SPENQ96T58 3664 aaKnown RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 TRAV27A0A087WT01 109 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 TRBV11-1A0A0K0K1C0 115 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 ANKRD34BA5PLL1 514 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 SERINC4A6NH21 518 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 TLX2O43763 284 aaPredicted RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 PRKYO43930 277 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 ADAP00813 363 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 IFI30P13284 250 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 ABCD3P28288 659 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 PPICP45877 212 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 OMPP47874 163 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 MASP1P48740 699 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 TUBA4AP68366 448 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 PLCXD2Q0VAA5 305 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 RAB39AQ14964 217 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 TOMM34Q15785 309 aaPredicted RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 IGSF11Q5DX21 431 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 LRRC17Q8N6Y2 441 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 APCDD1LQ8NCL9 501 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 SLC46A1Q96NT5 459 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 PARD6AQ9NPB6 346 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 MEPEQ9NQ76 525 aaPredicted RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 MGAT4BQ9UQ53 548 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 PTRH2Q9Y3E5 179 aaKnown RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 DMXL2Q8TDJ6 3036 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 CEP295Q9C0D2 2601 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 BLACEA4D250 179 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 ZAR1LA6NP61 321 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 GTPBP1O00178 669 aaKnown RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 ENTPD6O75354 484 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 MT-ND2P03891 347 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 DRD5P21918 477 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 FBXW4P57775 412 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 SMIM11AP58511 58 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 EIPR1Q53HC9 387 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 ALG10BQ5I7T1 473 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 XAF1Q6GPH4 301 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 IGFN1Q86VF2 1251 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 CLVS1Q8IUQ0 354 aaPredicted RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 SETD9Q8NE22 299 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 OMA1Q96E52 524 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 NODALQ96S42 347 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 PITX2Q99697 317 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 WDR77Q9BQA1 342 aaPredicted RBP10.08□□□□□ -0.8
GGPS1-201ENST00000282841 G6PC3Q9BUM1 346 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 LHPPQ9H008 270 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 GALNT9Q9HCQ5 603 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 C12orf4Q9NQ89 552 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 LOXL2Q9Y4K0 774 aa10.08□□□□□ -0.8
GGPS1-201ENST00000282841 TRAPPC13A5PLN9 417 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 FAM183AA6NL82 134 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 NPIPB9F8W1W9 429 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 FLRT2O43155 660 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 CPNE3O75131 537 aaKnown RBP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 NUDT14O95848 222 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 ACP1P24666 158 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 ITPKBP27987 946 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 IL12BP29460 328 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 RCVRNP35243 200 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 EIF2B2P49770 351 aaKnown RBP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 GPR143P51810 404 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 RNF4P78317 190 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 INSM1Q01101 510 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 C4orf46Q504U0 113 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 C1orf94Q6P1W5 598 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 SHFQ7M4L6 423 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 SLC29A4Q7RTT9 530 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 DTX3Q8N9I9 347 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 OR13C2Q8NGS9 318 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 RHOXF1Q8NHV9 184 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 FNDC8Q8TC99 324 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 ACOT11Q8WXI4 607 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 SAMD8Q96LT4 415 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 HCRTR2O43614 444 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 CDC40O60508 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 LYPD3O95274 346 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 AK1P00568 194 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 STSP08842 583 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 SAGP10523 405 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 PCSK6P29122 969 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 EMX1Q04741 257 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 DCTN2Q13561 401 aaKnown RBP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 FGFBP1Q14512 234 aa10.07□□□□□ -0.8
GGPS1-201ENST00000282841 INPP5JQ15735 1006 aaPredicted RBP10.07□□□□□ -0.8
GGPS1-201ENST00000282841 ZNF773Q6PK81 442 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms