RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 HNRNPKP61978 463 aaKnown RBP eCLIP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 TUBA1BP68363 451 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MGAT2Q10469 447 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 IRF3Q14653 427 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 NSDHLQ15738 373 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 CEBPEQ15744 281 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 LPAL2Q16609 132 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 KLHL22Q53GT1 634 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FAM27D1Q5T7N8 215 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FAM69BQ5VUD6 431 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 NPSR1Q6W5P4 371 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 TUBA1AQ71U36 451 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MARCH9Q86YJ5 346 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 EGFL6Q8IUX8 553 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 GJD3Q8N144 294 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 PROKR2Q8NFJ6 384 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 OR52E2Q8NGJ4 325 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 HPS1Q92902 700 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 HLA-CQ95604 372 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SENP5Q96HI0 755 aaPredicted RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 HS6ST2Q96MM7 605 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FOXN4Q96NZ1 517 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 ERMAPQ96PL5 475 aaPredicted RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 NUDT22Q9BRQ3 303 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 ORAI3Q9BRQ5 295 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 OR10A5Q9H207 317 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MMP27Q9H306 513 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MEPEQ9NQ76 525 aaPredicted RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FAIMQ9NVQ4 179 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 ZNF346Q9UL40 294 aaKnown RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 CFL2Q9Y281 166 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 CDH10Q9Y6N8 788 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 RNF215Q9Y6U7 377 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MPDZO75970 2070 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 DAPL1A0PJW8 107 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FAM86C2PA6NEL3 165 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 CHURC1-FNTBB4DL54 471 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 PRR23D1E9PI22 279 aaPredicted RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SURF4O15260 269 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 COQ9O75208 318 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 ZGLP1P0C6A0 271 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 PRR23D2P0DMB1 279 aaPredicted RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SLC1A3P43003 542 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FNTBP49356 437 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 RACK1P63244 317 aaKnown RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 DECR1Q16698 335 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 RNASE12Q5GAN4 147 aaKnown RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FHL5Q5TD97 284 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 PRPF38BQ5VTL8 546 aaKnown RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MEDAGQ5VYS4 303 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 CBLN3Q6UW01 205 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 KIRREL2Q6UWL6 708 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MED25Q71SY5 747 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SDR16C5Q8N3Y7 309 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 TMEM99Q8N816 258 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 ZNF563Q8TA94 476 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 UFD1Q92890 307 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 DIRAS2Q96HU8 199 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 PRSS27Q9BQR3 290 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 KRCC1Q9NPI7 259 aaPredicted RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 TXNL4BQ9NX01 149 aaKnown RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MKL2Q9ULH7 1088 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 GRIP1Q9Y3R0 1128 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 PCDHGA3Q9Y5H0 932 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 DENND4AQ7Z401 1863 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 CACNA1HO95180 2353 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 RIIAD1A6NNX1 92 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 H7C1C5 153 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SOX1O00570 391 aaPredicted RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SLC30A4O14863 429 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 NGFRP08138 427 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 LIMS3P0CW19 117 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 LIMS4P0CW20 117 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 TNFSF8P32971 234 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SLC15A1P46059 708 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 CENPAP49450 140 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 BCAP31P51572 246 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 PPP5CP53041 499 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 LCN6P62502 163 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SKP1P63208 163 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 ARHGAP40Q5TG30 622 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FAM131AQ6UXB0 335 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 TMPRSS11AQ6ZMR5 421 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SYT9Q86SS6 491 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 ZNF554Q86TJ5 538 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 LINC00471Q8N535 108 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 ATP6V1C2Q8NEY4 427 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 FAM174AQ8TBP5 190 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 RFKQ969G6 155 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 TCTN2Q96GX1 697 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 KLHDC3Q9BQ90 382 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 BARHL1Q9BZE3 327 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 NXF5Q9H1B4 397 aaKnown RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 SMURF1Q9HCE7 757 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 TRPV5Q9NQA5 729 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 CUTCQ9NTM9 273 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 STUB1Q9UNE7 303 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 PLCL2Q9UPR0 1127 aa5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 MRPS17Q9Y2R5 130 aaKnown RBP5.58□□□□□ -1.52
TNFSF4-201ENST00000281834 E9PQ18 207 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms